|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (neg_somatic_049)
|
15m 55s |
47s |
12m 13s |
2m 54s |
2.7 GB |
1168% |
155.8 GB |
32.1 MB |
33.9 GB |
720.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (neg_somatic_049)
|
7s |
2s |
3s |
2s |
252.6 MB |
377% |
96.6 MB |
1.3 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (neg_somatic_049)
|
6s |
1s |
2s |
3s |
252.3 MB |
339% |
96.3 MB |
925.1 KB |
0 bytes |
936.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (neg_somatic_049)
|
28s |
7s |
8s |
12s |
64.6 MB |
251% |
3.2 GB |
2.4 MB |
0 bytes |
584.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (neg_somatic_049)
|
18s |
4s |
4s |
9s |
603.1 MB |
3126% |
1.1 GB |
5.3 MB |
0 bytes |
28.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (neg_somatic_049)
|
3s |
1s |
- |
- |
26.0 MB |
6519% |
9.7 MB |
1.2 MB |
0 bytes |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (neg_somatic_049)
|
21s |
4s |
8s |
8s |
71.7 MB |
376% |
3.4 GB |
20.7 MB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (neg_somatic_049)
|
4s |
2s |
0s |
1s |
3.6 MB |
315% |
188.6 KB |
865 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (neg_somatic_049)
|
5s |
2s |
1s |
2s |
3.2 MB |
3212% |
5.8 MB |
1.3 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (neg_somatic_049)
|
6s |
4s |
0s |
1s |
17.2 MB |
100% |
32.6 MB |
28.2 MB |
0 bytes |
28.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (neg_somatic_049)
|
7s |
2s |
3s |
1s |
514.4 MB |
886% |
93.7 MB |
7.8 MB |
0 bytes |
7.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (neg_somatic_049)
|
3s |
1s |
0s |
1s |
16.3 MB |
100% |
39.9 MB |
28.9 MB |
0 bytes |
28.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (neg_somatic_049)
|
4s |
1s |
0s |
2s |
18.0 MB |
100% |
38.0 MB |
28.9 MB |
0 bytes |
28.9 MB |
1 |