|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_000)
|
10m 21s |
1m 7s |
7m 30s |
1m 43s |
1.9 GB |
1163% |
95.6 GB |
9.0 MB |
0 bytes |
698.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_000)
|
17s |
5s |
3s |
8s |
383.7 MB |
2168% |
732.6 MB |
2.6 MB |
0 bytes |
26.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_000)
|
6s |
1s |
3s |
2s |
259.9 MB |
356% |
96.7 MB |
1.4 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_000)
|
22s |
5s |
7s |
9s |
60.3 MB |
537% |
3.4 GB |
7.2 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_000)
|
6s |
1s |
3s |
2s |
292.7 MB |
388% |
98.7 MB |
4.1 MB |
0 bytes |
4.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_000)
|
19s |
2s |
7s |
9s |
85.9 MB |
530% |
3.3 GB |
9.6 MB |
0 bytes |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_000)
|
3s |
2s |
- |
- |
22.4 MB |
2324% |
10.4 MB |
1.2 MB |
0 bytes |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_000)
|
3s |
2s |
0s |
0s |
3.4 MB |
264% |
230.8 KB |
844 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_000)
|
6s |
1s |
1s |
4s |
3.4 MB |
3113% |
5.8 MB |
1.4 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_000)
|
3s |
1s |
0s |
1s |
16.9 MB |
99% |
45.2 MB |
39.7 MB |
0 bytes |
39.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_000)
|
8s |
3s |
3s |
1s |
517.1 MB |
880% |
98.5 MB |
10.3 MB |
0 bytes |
10.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_000)
|
4s |
1s |
1s |
1s |
16.7 MB |
100% |
53.2 MB |
41.0 MB |
0 bytes |
41.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_000)
|
4s |
1s |
0s |
2s |
17.6 MB |
100% |
51.3 MB |
41.0 MB |
0 bytes |
41.0 MB |
1 |