|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_001)
|
8s |
2s |
4s |
2s |
575.0 MB |
299% |
105.2 MB |
11.7 MB |
0 bytes |
11.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_001)
|
6s |
1s |
3s |
2s |
272.6 MB |
363% |
98.0 MB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_001)
|
21s |
2s |
8s |
10s |
40.7 MB |
275% |
3.7 GB |
22.2 MB |
0 bytes |
4.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_001)
|
1h 13m |
1m 6s |
1h 6m |
6m 22s |
6.9 GB |
1183% |
312.2 GB |
110.8 MB |
96.7 GB |
782.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_001)
|
20s |
2s |
9s |
8s |
98.7 MB |
507% |
4.0 GB |
133.1 MB |
0 bytes |
15.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_001)
|
23s |
1s |
11s |
10s |
902.4 MB |
5412% |
2.4 GB |
25.7 MB |
0 bytes |
46.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_001)
|
5s |
3s |
1s |
1s |
23.2 MB |
2967% |
26.6 MB |
10.3 MB |
0 bytes |
10.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_001)
|
5s |
4s |
0s |
0s |
3.6 MB |
2667% |
484.4 KB |
874 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_001)
|
6s |
1s |
1s |
4s |
3.3 MB |
1751% |
31.0 MB |
10.8 MB |
0 bytes |
10.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_001)
|
6s |
1s |
2s |
2s |
23.6 MB |
100% |
298.4 MB |
268.0 MB |
0 bytes |
268.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_001)
|
12s |
2s |
7s |
2s |
519.5 MB |
445% |
200.7 MB |
61.5 MB |
0 bytes |
61.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_001)
|
7s |
1s |
3s |
2s |
125.6 MB |
100% |
310.4 MB |
273.0 MB |
0 bytes |
273.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_001)
|
6s |
1s |
3s |
1s |
66.7 MB |
100% |
309.4 MB |
273.8 MB |
0 bytes |
273.8 MB |
1 |