|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_003)
|
43m 27s |
1m 45s |
37m 21s |
4m 20s |
4.3 GB |
1189% |
257.6 GB |
102.1 MB |
63.3 GB |
774.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_003)
|
9s |
2s |
5s |
2s |
498.0 MB |
276% |
105.3 MB |
11.7 MB |
0 bytes |
11.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_003)
|
8s |
2s |
4s |
2s |
435.1 MB |
321% |
98.0 MB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_003)
|
21s |
3s |
8s |
9s |
60.4 MB |
345% |
3.7 GB |
22.2 MB |
0 bytes |
4.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_003)
|
27s |
5s |
11s |
10s |
899.6 MB |
5196% |
2.4 GB |
25.3 MB |
0 bytes |
45.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_003)
|
23s |
5s |
9s |
8s |
99.0 MB |
491% |
4.0 GB |
130.3 MB |
0 bytes |
15.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_003)
|
3s |
1s |
1s |
1s |
21.6 MB |
2945% |
26.5 MB |
10.2 MB |
0 bytes |
10.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_003)
|
4s |
3s |
0s |
0s |
3.5 MB |
1961% |
464.3 KB |
877 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_003)
|
8s |
3s |
1s |
4s |
3.2 MB |
1741% |
30.8 MB |
10.7 MB |
0 bytes |
10.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_003)
|
6s |
1s |
2s |
2s |
23.7 MB |
100% |
296.0 MB |
265.8 MB |
0 bytes |
265.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_003)
|
11s |
2s |
7s |
1s |
519.3 MB |
434% |
199.9 MB |
61.1 MB |
0 bytes |
61.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_003)
|
7s |
1s |
3s |
2s |
125.6 MB |
100% |
308.0 MB |
270.8 MB |
0 bytes |
270.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_003)
|
6s |
1s |
3s |
1s |
67.0 MB |
100% |
307.0 MB |
271.6 MB |
0 bytes |
271.7 MB |
1 |