|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_005)
|
22s |
5s |
7s |
9s |
60.0 MB |
513% |
3.7 GB |
22.9 MB |
0 bytes |
4.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_005)
|
7s |
2s |
3s |
2s |
319.3 MB |
350% |
98.1 MB |
3.1 MB |
0 bytes |
3.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_005)
|
8s |
1s |
5s |
2s |
514.6 MB |
286% |
105.7 MB |
12.1 MB |
0 bytes |
12.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_005)
|
23s |
1s |
12s |
9s |
908.8 MB |
5779% |
2.5 GB |
26.8 MB |
0 bytes |
47.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_005)
|
1h 2m |
1m 44s |
55m 36s |
5m 13s |
9.0 GB |
1190% |
415.2 GB |
149.8 MB |
122.1 GB |
821.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_005)
|
22s |
3s |
10s |
8s |
69.8 MB |
252% |
4.1 GB |
139.2 MB |
0 bytes |
15.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_005)
|
4s |
2s |
1s |
1s |
13.8 MB |
1473% |
27.1 MB |
10.6 MB |
0 bytes |
10.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_005)
|
7s |
6s |
0s |
0s |
3.6 MB |
1822% |
467.1 KB |
874 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_005)
|
6s |
2s |
1s |
3s |
3.3 MB |
1739% |
31.9 MB |
11.2 MB |
0 bytes |
11.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_005)
|
6s |
1s |
2s |
2s |
24.0 MB |
100% |
305.6 MB |
274.5 MB |
0 bytes |
274.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_005)
|
12s |
2s |
7s |
2s |
514.6 MB |
374% |
203.6 MB |
62.9 MB |
0 bytes |
62.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_005)
|
7s |
1s |
3s |
2s |
125.5 MB |
100% |
317.7 MB |
279.6 MB |
0 bytes |
279.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_005)
|
9s |
3s |
3s |
2s |
65.9 MB |
100% |
316.7 MB |
280.4 MB |
0 bytes |
280.4 MB |
1 |