|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_017)
|
9s |
2s |
4s |
3s |
363.9 MB |
344% |
98.0 MB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_017)
|
9s |
2s |
5s |
2s |
618.9 MB |
269% |
105.3 MB |
11.7 MB |
0 bytes |
11.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_017)
|
20s |
3s |
7s |
9s |
67.7 MB |
420% |
3.7 GB |
22.6 MB |
0 bytes |
4.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_017)
|
46m 18s |
1m 58s |
40m 9s |
4m 10s |
4.5 GB |
1186% |
268.5 GB |
138.9 MB |
68.3 GB |
810.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_017)
|
29s |
5s |
14s |
9s |
805.1 MB |
6015% |
2.4 GB |
25.6 MB |
0 bytes |
46.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_017)
|
20s |
2s |
9s |
8s |
98.7 MB |
497% |
4.0 GB |
131.7 MB |
0 bytes |
15.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_017)
|
3s |
1s |
1s |
1s |
24.9 MB |
3026% |
26.7 MB |
10.3 MB |
0 bytes |
10.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_017)
|
4s |
3s |
0s |
0s |
3.6 MB |
1930% |
465.8 KB |
877 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_017)
|
6s |
1s |
1s |
4s |
3.2 MB |
1751% |
31.0 MB |
10.8 MB |
0 bytes |
10.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_017)
|
6s |
1s |
2s |
2s |
24.1 MB |
100% |
297.0 MB |
266.6 MB |
0 bytes |
266.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_017)
|
8s |
2s |
3s |
2s |
125.4 MB |
100% |
309.0 MB |
271.6 MB |
0 bytes |
271.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_017)
|
11s |
2s |
7s |
1s |
519.7 MB |
458% |
200.4 MB |
61.3 MB |
0 bytes |
61.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_017)
|
7s |
1s |
3s |
2s |
66.3 MB |
100% |
307.9 MB |
272.4 MB |
0 bytes |
272.5 MB |
1 |