|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_020)
|
8s |
2s |
3s |
3s |
445.8 MB |
316% |
98.0 MB |
2.9 MB |
0 bytes |
2.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_020)
|
22s |
14s |
5s |
3s |
661.2 MB |
284% |
104.8 MB |
11.3 MB |
0 bytes |
11.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_020)
|
18s |
2s |
7s |
8s |
60.1 MB |
519% |
3.7 GB |
21.9 MB |
0 bytes |
4.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_020)
|
39m 8s |
2m 9s |
32m 37s |
4m 21s |
7.8 GB |
1176% |
277.3 GB |
142.6 MB |
74.1 GB |
814.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_020)
|
26s |
1s |
13s |
11s |
872.2 MB |
5428% |
2.4 GB |
25.6 MB |
0 bytes |
46.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_020)
|
21s |
2s |
9s |
9s |
98.7 MB |
491% |
4.0 GB |
133.9 MB |
0 bytes |
15.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_020)
|
6s |
3s |
1s |
2s |
23.2 MB |
2941% |
26.6 MB |
10.3 MB |
0 bytes |
10.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_020)
|
7s |
6s |
0s |
0s |
3.6 MB |
1947% |
466.3 KB |
876 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_020)
|
8s |
3s |
1s |
4s |
3.3 MB |
1738% |
31.0 MB |
10.8 MB |
0 bytes |
10.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_020)
|
6s |
1s |
2s |
2s |
24.1 MB |
100% |
299.8 MB |
269.3 MB |
0 bytes |
269.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_020)
|
12s |
2s |
7s |
2s |
519.9 MB |
448% |
201.2 MB |
61.7 MB |
0 bytes |
61.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_020)
|
8s |
1s |
3s |
3s |
125.1 MB |
100% |
311.9 MB |
274.3 MB |
0 bytes |
274.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_020)
|
7s |
1s |
3s |
2s |
66.7 MB |
100% |
310.9 MB |
275.1 MB |
0 bytes |
275.1 MB |
1 |