|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_045)
|
6s |
1s |
3s |
2s |
283.8 MB |
367% |
98.0 MB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_045)
|
7s |
1s |
3s |
3s |
489.2 MB |
307% |
105.1 MB |
11.5 MB |
0 bytes |
11.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_045)
|
19s |
2s |
7s |
9s |
60.0 MB |
503% |
3.7 GB |
22.6 MB |
0 bytes |
4.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_045)
|
59m 59s |
1m 20s |
51m 1s |
7m 37s |
9.5 GB |
1190% |
401.3 GB |
124.5 MB |
122.6 GB |
796.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_045)
|
31s |
5s |
14s |
11s |
816.5 MB |
3816% |
2.5 GB |
26.5 MB |
0 bytes |
47.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_045)
|
22s |
2s |
10s |
9s |
98.8 MB |
389% |
4.1 GB |
138.5 MB |
0 bytes |
15.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_045)
|
5s |
3s |
- |
- |
23.3 MB |
3002% |
26.8 MB |
10.5 MB |
0 bytes |
10.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_045)
|
4s |
2s |
0s |
1s |
3.7 MB |
1988% |
465.3 KB |
876 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_045)
|
6s |
1s |
1s |
4s |
3.2 MB |
1734% |
31.5 MB |
11.0 MB |
0 bytes |
11.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_045)
|
6s |
1s |
2s |
2s |
23.8 MB |
100% |
302.8 MB |
272.0 MB |
0 bytes |
272.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_045)
|
12s |
2s |
7s |
2s |
513.9 MB |
379% |
202.3 MB |
62.2 MB |
0 bytes |
62.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_045)
|
7s |
1s |
3s |
2s |
125.5 MB |
100% |
314.9 MB |
277.0 MB |
0 bytes |
277.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_045)
|
9s |
4s |
3s |
1s |
66.7 MB |
100% |
313.9 MB |
277.9 MB |
0 bytes |
277.9 MB |
1 |