|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (pos_somatic_052)
|
1h 5m |
1m 26s |
55m 10s |
8m 27s |
10.9 GB |
1192% |
518.7 GB |
163.0 MB |
164.2 GB |
834.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (pos_somatic_052)
|
22s |
16s |
2s |
4s |
314.1 MB |
362% |
98.1 MB |
3.1 MB |
0 bytes |
3.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (pos_somatic_052)
|
8s |
2s |
4s |
2s |
497.1 MB |
301% |
105.9 MB |
12.4 MB |
0 bytes |
12.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (pos_somatic_052)
|
19s |
2s |
7s |
9s |
60.0 MB |
530% |
3.7 GB |
23.0 MB |
0 bytes |
4.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (pos_somatic_052)
|
27s |
1s |
16s |
9s |
822.1 MB |
2291% |
2.5 GB |
27.1 MB |
4.0 KB |
47.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (pos_somatic_052)
|
21s |
2s |
9s |
9s |
98.7 MB |
484% |
4.1 GB |
140.7 MB |
0 bytes |
15.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (pos_somatic_052)
|
4s |
3s |
0s |
0s |
3.5 MB |
2053% |
466.6 KB |
874 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (pos_somatic_052)
|
3s |
1s |
1s |
1s |
22.4 MB |
2923% |
27.2 MB |
10.7 MB |
0 bytes |
10.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (pos_somatic_052)
|
6s |
1s |
1s |
4s |
3.2 MB |
1712% |
32.1 MB |
11.3 MB |
0 bytes |
11.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (pos_somatic_052)
|
6s |
1s |
2s |
2s |
23.7 MB |
100% |
309.2 MB |
277.8 MB |
0 bytes |
277.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (pos_somatic_052)
|
12s |
2s |
7s |
2s |
519.8 MB |
451% |
204.8 MB |
63.5 MB |
0 bytes |
63.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (pos_somatic_052)
|
7s |
1s |
3s |
2s |
125.2 MB |
100% |
321.5 MB |
283.0 MB |
0 bytes |
283.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (pos_somatic_052)
|
6s |
1s |
3s |
1s |
65.9 MB |
100% |
320.5 MB |
283.8 MB |
0 bytes |
283.9 MB |
1 |