File Info

Filename
samplesheet_input.csv
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/6fc8fcf62d901621aafb1421fdb228/samplesheet_input.csv
Size
83.9 KB
Task
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
Attempt

Content

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normal_sample_id,normal_sample_bam,normal_sample_bai,tumor_sample_id,tumor_sample_bam,tumor_sample_bai,id,germline_cnv_model
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00527_0052_A23KYMYLT4__5b7749b--20260306-234544/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00527_0052_A23KYMYLT4__5b7749b--20260306-234544/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1.recalibrated.bam.bai,pos_somatic_000,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0054_A23L5NJLT4__5d8e7d70--20260227-160009/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0054_A23L5NJLT4__5d8e7d70--20260227-160009/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1.recalibrated.bam.bai,pos_somatic_001,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20251222_LH00527_0043_B23FC2GLT4__5d8e7d70--20260228-200340/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20251222_LH00527_0043_B23FC2GLT4__5d8e7d70--20260228-200340/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47.recalibrated.bam.bai,pos_somatic_002,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_23K7YCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260203_LH00527_0050_B23K7YCLT4__5d8e7d70--20260228-200338/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260203_LH00527_0050_B23K7YCLT4__5d8e7d70--20260228-200338/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1.recalibrated.bam.bai,pos_somatic_003,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0057_A23L3H3LT4__5d8e7d70--20260301-121010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0057_A23L3H3LT4__5d8e7d70--20260301-121010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1.recalibrated.bam.bai,pos_somatic_004,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0060_A23MHLYLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0060_A23MHLYLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1.recalibrated.bam.bai,pos_somatic_005,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0061_B23MHVMLT4__5b7749bb--20260306-132009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0061_B23MHVMLT4__5b7749bb--20260306-132009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1.recalibrated.bam.bai,pos_somatic_006,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00527_0062_B23MMVMLT4__5d7f62c6--20260315-091014/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00527_0062_B23MMVMLT4__5d7f62c6--20260315-091014/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1.recalibrated.bam.bai,pos_somatic_007,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0062_A23MHVGLT4__5b7749bb--20260306-132010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0062_A23MHVGLT4__5b7749bb--20260306-132010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1.recalibrated.bam.bai,pos_somatic_008,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260320_LH00519_0071_B23KCGWLT4__d7a6b981--20260322-105015/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260320_LH00519_0071_B23KCGWLT4__d7a6b981--20260322-105015/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1.recalibrated.bam.bai,pos_somatic_009,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0056_B23MHWGLT4__444aee1e--20260301-135529/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0056_B23MHWGLT4__444aee1e--20260301-135529/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1.recalibrated.bam.bai,pos_somatic_010,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0069_A23KCGYLT4__d7a6b981--20260320-093016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0069_A23KCGYLT4__d7a6b981--20260320-093016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1.recalibrated.bam.bai,pos_somatic_011,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0068_A23MCTVLT4__d7a6b981--20260325-072016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0068_A23MCTVLT4__d7a6b981--20260325-072016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1.recalibrated.bam.bai,pos_somatic_012,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0064_A23MHTWLT4__d7a6b981--20260318-095010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0064_A23MHTWLT4__d7a6b981--20260318-095010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1.recalibrated.bam.bai,pos_somatic_013,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0063_B23MHY7LT4__d7a6b981--20260318-094010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0063_B23MHY7LT4__d7a6b981--20260318-094010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1.recalibrated.bam.bai,pos_somatic_014,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0070_B23KFCWLT4__d7a6b981--20260320-092016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0070_B23KFCWLT4__d7a6b981--20260320-092016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1.recalibrated.bam.bai,pos_somatic_015,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0069_B23MCVGLT4__d7a6b981--20260325-072017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0069_B23MCVGLT4__d7a6b981--20260325-072017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1.recalibrated.bam.bai,pos_somatic_016,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0021/20260113_LH00527_0046_A23FG3YLT4__aa3fd045--20260225-014632/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0021/20260113_LH00527_0046_A23FG3YLT4__aa3fd045--20260225-014632/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1.recalibrated.bam.bai,pos_somatic_017,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0242_A23H5VJLT4__aa3fd045--20260224-223946/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0242_A23H5VJLT4__aa3fd045--20260224-223946/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1.recalibrated.bam.bai,pos_somatic_018,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0233_A23LGTTLT4__aa3fd045--20260226-233240/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0233_A23LGTTLT4__aa3fd045--20260226-233240/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1.recalibrated.bam.bai,pos_somatic_019,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0248_A23MHKLLT4__aa3fd04--20260223-202122/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0248_A23MHKLLT4__aa3fd04--20260223-202122/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1.recalibrated.bam.bai,pos_somatic_020,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260223_LH00166_0250_A23MJ3TLT4__aa3fd045--20260225-060009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260223_LH00166_0250_A23MJ3TLT4__aa3fd045--20260225-060009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1.recalibrated.bam.bai,pos_somatic_021,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0265_A23NYHCLT4__5d7f62c6--20260316-162010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0265_A23NYHCLT4__5d7f62c6--20260316-162010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1.recalibrated.bam.bai,pos_somatic_022,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0243_B23KKT2LT4__aa3fd045--20260224-224017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0243_B23KKT2LT4__aa3fd045--20260224-224017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1.recalibrated.bam.bai,pos_somatic_023,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0234_B23LG35LT4__aa3fd045--20260226-233302/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0234_B23LG35LT4__aa3fd045--20260226-233302/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1.recalibrated.bam.bai,pos_somatic_024,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260206_LH00166_0240_B23LG3FLT4__8aacaa71--20260305-220752/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260206_LH00166_0240_B23LG3FLT4__8aacaa71--20260305-220752/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1.recalibrated.bam.bai,pos_somatic_025,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0249_B23MHJYLT4__d07803d4--20260223-183627/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0249_B23MHJYLT4__d07803d4--20260223-183627/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1.recalibrated.bam.bai,pos_somatic_026,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00166_0255_B23NLHKLT4__5d8e7d70--20260301-080009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00166_0255_B23NLHKLT4__5d8e7d70--20260301-080009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1.recalibrated.bam.bai,pos_somatic_027,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0266_B23NYJ5LT4__5d7f62c6--20260315-121013/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0266_B23NYJ5LT4__5d7f62c6--20260315-121013/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1.recalibrated.bam.bai,pos_somatic_028,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00519_0073_A23KC75LT4__d7a6b981--20260325-161016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00519_0073_A23KC75LT4__d7a6b981--20260325-161016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1.recalibrated.bam.bai,pos_somatic_029,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0068_A23MHKVLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0068_A23MHKVLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1.recalibrated.bam.bai,pos_somatic_030,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0065_A23MHWWLT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0065_A23MHWWLT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1.recalibrated.bam.bai,pos_somatic_031,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0065_B23KCHGLT4__5d7f62c6--20260315-113014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0065_B23KCHGLT4__5d7f62c6--20260315-113014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1.recalibrated.bam.bai,pos_somatic_032,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260302_LH00527_0058_B23MHVHLT4__2cd6b81d--20260304-091011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260302_LH00527_0058_B23MHVHLT4__2cd6b81d--20260304-091011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1.recalibrated.bam.bai,pos_somatic_033,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0061_B23MHVNLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0061_B23MHVNLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1.recalibrated.bam.bai,pos_somatic_034,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0066_A23KFCVLT4__5d7f62c6--20260315-112014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0066_A23KFCVLT4__5d7f62c6--20260315-112014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1.recalibrated.bam.bai,pos_somatic_035,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0066_B23KCK5LT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0066_B23KCK5LT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1.recalibrated.bam.bai,pos_somatic_036,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0067_B23MF2NLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0067_B23MF2NLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1.recalibrated.bam.bai,pos_somatic_037,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0259_A23GW7HLT4__2cd6b81d--20260306-063013/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0259_A23GW7HLT4__2cd6b81d--20260306-063013/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1.recalibrated.bam.bai,pos_somatic_038,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00995_0017_A23MYM7LT4__5b7749bb--20260306-133014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00995_0017_A23MYM7LT4__5b7749bb--20260306-133014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1.recalibrated.bam.bai,pos_somatic_039,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260309_LH00166_0263_A23NLJYLT4__5d7f62c6--20260311-084011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260309_LH00166_0263_A23NLJYLT4__5d7f62c6--20260311-084011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1.recalibrated.bam.bai,pos_somatic_040,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0260_B23NYHYLT4__2cd6b81d--20260306-064011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0260_B23NYHYLT4__2cd6b81d--20260306-064011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1.recalibrated.bam.bai,pos_somatic_041,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23MCVNLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260327_LH00519_0078_A23MCVNLT4__0ce77ad5--20260331-121019/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MCVNLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MCVNLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260327_LH00519_0078_A23MCVNLT4__0ce77ad5--20260331-121019/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MCVNLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MCVNLT4_1.recalibrated.bam.bai,pos_somatic_042,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23T23MLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260401_LH00527_0072_A23T23MLT4__0ce77ad5--20260403-122016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23T23MLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23T23MLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260401_LH00527_0072_A23T23MLT4__0ce77ad5--20260403-122016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23T23MLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23T23MLT4_1.recalibrated.bam.bai,pos_somatic_043,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_A23KFCKLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260403_LH00527_0074_A23KFCKLT4__0ce77ad5--20260405-094015/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_A23KFCKLT4_1/FFPE_HD789_01_p1_gDNA_0004_A23KFCKLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260403_LH00527_0074_A23KFCKLT4__0ce77ad5--20260405-094015/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_A23KFCKLT4_1/FFPE_HD789_01_p1_gDNA_0004_A23KFCKLT4_1.recalibrated.bam.bai,pos_somatic_044,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_B23MF2JLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260327_LH00519_0077_B23MF2JLT4__0ce77ad5--20260331-121019/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23MF2JLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23MF2JLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260327_LH00519_0077_B23MF2JLT4__0ce77ad5--20260331-121019/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23MF2JLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23MF2JLT4_1.recalibrated.bam.bai,pos_somatic_045,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23T22CLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260415_LH00166_0289_A23T22CLT4__0ce77ad5--20260421-164009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23T22CLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23T22CLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260415_LH00166_0289_A23T22CLT4__0ce77ad5--20260421-164009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23T22CLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23T22CLT4_1.recalibrated.bam.bai,pos_somatic_046,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23T277LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260420_LH00166_0293_A23T277LT4__0ce77ad5--20260427-161016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23T277LT4_1/FFPE_HD789_01_p1_gDNA_0005_A23T277LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260420_LH00166_0293_A23T277LT4__0ce77ad5--20260427-161016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23T277LT4_1/FFPE_HD789_01_p1_gDNA_0005_A23T277LT4_1.recalibrated.bam.bai,pos_somatic_047,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23T7FVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260417_LH00166_0291_A23T7FVLT4__0ce77ad5--20260420-091011/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23T7FVLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23T7FVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260417_LH00166_0291_A23T7FVLT4__0ce77ad5--20260420-091011/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23T7FVLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23T7FVLT4_1.recalibrated.bam.bai,pos_somatic_048,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23T7FYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260417_LH00166_0292_B23T7FYLT4__0ce77ad5--20260420-091011/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23T7FYLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23T7FYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260417_LH00166_0292_B23T7FYLT4__0ce77ad5--20260420-091011/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23T7FYLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23T7FYLT4_1.recalibrated.bam.bai,pos_somatic_049,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23WJH3LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260501_LH00166_0299_B23WJH3LT4__0ce77ad5--20260503-070010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23WJH3LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23WJH3LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260501_LH00166_0299_B23WJH3LT4__0ce77ad5--20260503-070010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23WJH3LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23WJH3LT4_1.recalibrated.bam.bai,pos_somatic_050,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23NLY3LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260403_LH00519_0080_A23NLY3LT4__0ce77ad5--20260405-122016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23NLY3LT4_1/FFPE_HD789_01_p2_gDNA_01_A23NLY3LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260403_LH00519_0080_A23NLY3LT4__0ce77ad5--20260405-122016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23NLY3LT4_1/FFPE_HD789_01_p2_gDNA_01_A23NLY3LT4_1.recalibrated.bam.bai,pos_somatic_051,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23NMKMLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260330_LH00527_0071_A23NMKMLT4__0ce77ad5--20260401-094121/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23NMKMLT4_1/FFPE_HD789_01_p2_gDNA_01_A23NMKMLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260330_LH00527_0071_A23NMKMLT4__0ce77ad5--20260401-094121/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23NMKMLT4_1/FFPE_HD789_01_p2_gDNA_01_A23NMKMLT4_1.recalibrated.bam.bai,pos_somatic_052,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23TNKKLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260501_LH00527_0079_A23TNKKLT4__0ce77ad5--20260503-101010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TNKKLT4_1/FFPE_HD789_01_p2_gDNA_01_A23TNKKLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260501_LH00527_0079_A23TNKKLT4__0ce77ad5--20260503-101010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TNKKLT4_1/FFPE_HD789_01_p2_gDNA_01_A23TNKKLT4_1.recalibrated.bam.bai,pos_somatic_053,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23TNL2LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260520_LH00527_0091_A23TNL2LT4__8afaba2b--20260522-150030/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TNL2LT4_1/FFPE_HD789_01_p2_gDNA_01_A23TNL2LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260520_LH00527_0091_A23TNL2LT4__8afaba2b--20260522-150030/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TNL2LT4_1/FFPE_HD789_01_p2_gDNA_01_A23TNL2LT4_1.recalibrated.bam.bai,pos_somatic_054,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23TNLVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00519_0085_A23TNLVLT4__0ce77ad5--20260426-135016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TNLVLT4_1/FFPE_HD789_01_p2_gDNA_01_A23TNLVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00519_0085_A23TNLVLT4__0ce77ad5--20260426-135016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TNLVLT4_1/FFPE_HD789_01_p2_gDNA_01_A23TNLVLT4_1.recalibrated.bam.bai,pos_somatic_055,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23TYK7LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260513_LH00527_0086_A23TYK7LT4__8afaba2b--20260515-102026/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TYK7LT4_1/FFPE_HD789_01_p2_gDNA_01_A23TYK7LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260513_LH00527_0086_A23TYK7LT4__8afaba2b--20260515-102026/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23TYK7LT4_1/FFPE_HD789_01_p2_gDNA_01_A23TYK7LT4_1.recalibrated.bam.bai,pos_somatic_056,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23VCN5LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00519_0090_A23VCN5LT4__8afaba2b--20260513-165031/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23VCN5LT4_1/FFPE_HD789_01_p2_gDNA_01_A23VCN5LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00519_0090_A23VCN5LT4__8afaba2b--20260513-165031/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23VCN5LT4_1/FFPE_HD789_01_p2_gDNA_01_A23VCN5LT4_1.recalibrated.bam.bai,pos_somatic_057,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_A23TYF5LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260518_LH00527_0089_A23TYF5LT4__8afaba2b--20260520-104029/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_A23TYF5LT4_1/FFPE_HD789_01_p2_gDNA_02_A23TYF5LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260518_LH00527_0089_A23TYF5LT4__8afaba2b--20260520-104029/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_A23TYF5LT4_1/FFPE_HD789_01_p2_gDNA_02_A23TYF5LT4_1.recalibrated.bam.bai,pos_somatic_058,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23NLNCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260330_LH00527_0070_B23NLNCLT4__0ce77ad5--20260401-094120/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23NLNCLT4_1/FFPE_HD789_01_p2_gDNA_02_B23NLNCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260330_LH00527_0070_B23NLNCLT4__0ce77ad5--20260401-094120/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23NLNCLT4_1/FFPE_HD789_01_p2_gDNA_02_B23NLNCLT4_1.recalibrated.bam.bai,pos_somatic_059,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23NMJMLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260325_LH00519_0076_B23NMJMLT4__0ce77ad5--20260331-121018/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23NMJMLT4_1/FFPE_HD789_01_p2_gDNA_02_B23NMJMLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260325_LH00519_0076_B23NMJMLT4__0ce77ad5--20260331-121018/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23NMJMLT4_1/FFPE_HD789_01_p2_gDNA_02_B23NMJMLT4_1.recalibrated.bam.bai,pos_somatic_060,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23NN7CLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00519_0084_B23NN7CLT4__0ce77ad5--20260426-134016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23NN7CLT4_1/FFPE_HD789_01_p2_gDNA_02_B23NN7CLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00519_0084_B23NN7CLT4__0ce77ad5--20260426-134016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23NN7CLT4_1/FFPE_HD789_01_p2_gDNA_02_B23NN7CLT4_1.recalibrated.bam.bai,pos_somatic_061,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23T2M7LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260403_LH00519_0079_B23T2M7LT4__0ce77ad5--20260405-120016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23T2M7LT4_1/FFPE_HD789_01_p2_gDNA_02_B23T2M7LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260403_LH00519_0079_B23T2M7LT4__0ce77ad5--20260405-120016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23T2M7LT4_1/FFPE_HD789_01_p2_gDNA_02_B23T2M7LT4_1.recalibrated.bam.bai,pos_somatic_062,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23TTNGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260501_LH00519_0088_B23TTNGLT4__0ce77ad5--20260503-033010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23TTNGLT4_1/FFPE_HD789_01_p2_gDNA_02_B23TTNGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260501_LH00519_0088_B23TTNGLT4__0ce77ad5--20260503-033010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23TTNGLT4_1/FFPE_HD789_01_p2_gDNA_02_B23TTNGLT4_1.recalibrated.bam.bai,pos_somatic_063,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23VCMYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260513_LH00527_0085_B23VCMYLT4__8afaba2b--20260515-102024/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23VCMYLT4_1/FFPE_HD789_01_p2_gDNA_02_B23VCMYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260513_LH00527_0085_B23VCMYLT4__8afaba2b--20260515-102024/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23VCMYLT4_1/FFPE_HD789_01_p2_gDNA_02_B23VCMYLT4_1.recalibrated.bam.bai,pos_somatic_064,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23VCNCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00519_0091_B23VCNCLT4__8afaba2b--20260513-165034/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23VCNCLT4_1/FFPE_HD789_01_p2_gDNA_02_B23VCNCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00519_0091_B23VCNCLT4__8afaba2b--20260513-165034/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23VCNCLT4_1/FFPE_HD789_01_p2_gDNA_02_B23VCNCLT4_1.recalibrated.bam.bai,pos_somatic_065,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23WJCTLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260508_LH00995_0038_A23WJCTLT4__8afaba2b--20260510-114019/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23WJCTLT4_1/FFPE_HD789_01_p2_gDNA_03_A23WJCTLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260508_LH00995_0038_A23WJCTLT4__8afaba2b--20260510-114019/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23WJCTLT4_1/FFPE_HD789_01_p2_gDNA_03_A23WJCTLT4_1.recalibrated.bam.bai,pos_somatic_066,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_B23WHTGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260508_LH00995_0039_B23WHTGLT4__8afaba2b--20260510-115020/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_B23WHTGLT4_1/FFPE_HD789_01_p2_gDNA_03_B23WHTGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260508_LH00995_0039_B23WHTGLT4__8afaba2b--20260510-115020/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_B23WHTGLT4_1/FFPE_HD789_01_p2_gDNA_03_B23WHTGLT4_1.recalibrated.bam.bai,pos_somatic_067,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_04_A23NN2MLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00527_0077_A23NN2MLT4__a56fae1--20260429-021307_rerun/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23NN2MLT4_1/FFPE_HD789_01_p2_gDNA_04_A23NN2MLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00527_0077_A23NN2MLT4__a56fae1--20260429-021307_rerun/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23NN2MLT4_1/FFPE_HD789_01_p2_gDNA_04_A23NN2MLT4_1.recalibrated.bam.bai,pos_somatic_068,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_04_A23TNVHLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00527_0083_A23TNVHLT4__8afaba2b--20260513-165037/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23TNVHLT4_1/FFPE_HD789_01_p2_gDNA_04_A23TNVHLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00527_0083_A23TNVHLT4__8afaba2b--20260513-165037/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23TNVHLT4_1/FFPE_HD789_01_p2_gDNA_04_A23TNVHLT4_1.recalibrated.bam.bai,pos_somatic_069,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_04_A23TNVYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260504_LH00527_0081_A23TNVYLT4__c86dea0e--20260506-131012/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23TNVYLT4_1/FFPE_HD789_01_p2_gDNA_04_A23TNVYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260504_LH00527_0081_A23TNVYLT4__c86dea0e--20260506-131012/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23TNVYLT4_1/FFPE_HD789_01_p2_gDNA_04_A23TNVYLT4_1.recalibrated.bam.bai,pos_somatic_070,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_04_A23TYJCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260515_LH00527_0088_A23TYJCLT4__8afaba2b--20260517-111024/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23TYJCLT4_1/FFPE_HD789_01_p2_gDNA_04_A23TYJCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260515_LH00527_0088_A23TYJCLT4__8afaba2b--20260517-111024/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_A23TYJCLT4_1/FFPE_HD789_01_p2_gDNA_04_A23TYJCLT4_1.recalibrated.bam.bai,pos_somatic_071,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_04_B23TNVWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260520_LH00527_0092_B23TNVWLT4__8afaba2b--20260522-150032/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_B23TNVWLT4_1/FFPE_HD789_01_p2_gDNA_04_B23TNVWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260520_LH00527_0092_B23TNVWLT4__8afaba2b--20260522-150032/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_04_B23TNVWLT4_1/FFPE_HD789_01_p2_gDNA_04_B23TNVWLT4_1.recalibrated.bam.bai,pos_somatic_072,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_05_B23NN53LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260427_LH00519_0086_B23NN53LT4__0ce77ad5--20260429-142019/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23NN53LT4_1/FFPE_HD789_01_p2_gDNA_05_B23NN53LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260427_LH00519_0086_B23NN53LT4__0ce77ad5--20260429-142019/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23NN53LT4_1/FFPE_HD789_01_p2_gDNA_05_B23NN53LT4_1.recalibrated.bam.bai,pos_somatic_073,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_05_B23TTLFLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260518_LH00527_0090_B23TTLFLT4__8afaba2b--20260520-104032/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23TTLFLT4_1/FFPE_HD789_01_p2_gDNA_05_B23TTLFLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260518_LH00527_0090_B23TTLFLT4__8afaba2b--20260520-104032/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23TTLFLT4_1/FFPE_HD789_01_p2_gDNA_05_B23TTLFLT4_1.recalibrated.bam.bai,pos_somatic_074,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_05_B23TTLKLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00527_0084_B23TTLKLT4__8afaba2b--20260513-165040/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23TTLKLT4_1/FFPE_HD789_01_p2_gDNA_05_B23TTLKLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260511_LH00527_0084_B23TTLKLT4__8afaba2b--20260513-165040/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23TTLKLT4_1/FFPE_HD789_01_p2_gDNA_05_B23TTLKLT4_1.recalibrated.bam.bai,pos_somatic_075,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_05_B23TYFCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260506_LH00527_0082_B23TYFCLT4__6cb28135--20260508-110026/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23TYFCLT4_1/FFPE_HD789_01_p2_gDNA_05_B23TYFCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260506_LH00527_0082_B23TYFCLT4__6cb28135--20260508-110026/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23TYFCLT4_1/FFPE_HD789_01_p2_gDNA_05_B23TYFCLT4_1.recalibrated.bam.bai,pos_somatic_076,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_05_B23VCL7LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260504_LH00527_0080_B23VCL7LT4__c86dea0e--20260506-132014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23VCL7LT4_1/FFPE_HD789_01_p2_gDNA_05_B23VCL7LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260504_LH00527_0080_B23VCL7LT4__c86dea0e--20260506-132014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23VCL7LT4_1/FFPE_HD789_01_p2_gDNA_05_B23VCL7LT4_1.recalibrated.bam.bai,pos_somatic_077,
NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_05_B23VCMFLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260515_LH00527_0087_B23VCMFLT4__8afaba2b--20260517-111022/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23VCMFLT4_1/FFPE_HD789_01_p2_gDNA_05_B23VCMFLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260515_LH00527_0087_B23VCMFLT4__8afaba2b--20260517-111022/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_05_B23VCMFLT4_1/FFPE_HD789_01_p2_gDNA_05_B23VCMFLT4_1.recalibrated.bam.bai,pos_somatic_078,
80 rows