succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 4s 3s 0s 0s 0 bytes 103% 62.9 KB 182 bytes 0 bytes 0 bytes 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 16s 15s 0s 0s 0 bytes 139% 87.0 KB 463 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (PatientA_normal) 4s 2s - - 0 bytes 104% 59.7 KB 185 bytes 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (PatientB_normal) 3s 1s - - 0 bytes 100% 56.1 KB 192 bytes 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (PatientA_tumor1) 4s 2s - - 0 bytes 160% 55.8 KB 184 bytes 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (PatientA_tumor2) 13s 11s - - 0 bytes 188% 57.4 KB 188 bytes 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (PatientB_tumor) 5s 3s - - 0 bytes 237% 57.3 KB 188 bytes 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (PatientA_tumor1_vs_PatientA_normal) 28s 18s - - 3.1 MB 100% 1.1 MB 521 bytes 0 bytes 24.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (PatientA_tumor2_vs_PatientA_normal) 40s 31s - - 3.2 MB 101% 1.1 MB 522 bytes 0 bytes 24.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (PatientB_tumor_vs_PatientB_normal) 49s 39s - - 3.1 MB 103% 1.1 MB 527 bytes 0 bytes 24.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (PatientA_tumor1_vs_PatientA_normal) 20s 16s 1s 3s 244.4 MB 252% 46.6 MB 1.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (PatientA_tumor2_vs_PatientA_normal) 6s 2s 2s 2s 204.5 MB 254% 46.6 MB 1.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (PatientB_tumor_vs_PatientB_normal) 5s 2s 1s 2s 12.0 MB 259% 46.7 MB 1.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (PatientA_tumor1_vs_PatientA_normal) 20s 16s 1s 3s 10.2 MB 258% 46.7 MB 1.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (PatientA_tumor2_vs_PatientA_normal) 5s 1s 1s 3s 6.5 MB 280% 46.6 MB 1.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (PatientB_tumor_vs_PatientB_normal) 6s 2s 1s 3s 8.2 MB 268% 46.7 MB 1.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (PatientA_tumor1_vs_PatientA_normal;chr10_74133927-74134264.bed) 13s 4s - - 3.2 MB 100% 1.1 MB 499 bytes 0 bytes 16.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (PatientA_tumor1_vs_PatientA_normal;chr12_102480219-102480663.bed) 20s 11s - - 3.1 MB 111% 1.1 MB 494 bytes 0 bytes 16.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (PatientA_tumor1_vs_PatientA_normal;chr16_25246607-25247490.bed) 13s 4s - - 3.2 MB 100% 1.1 MB 500 bytes 0 bytes 16.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (PatientA_tumor1_vs_PatientA_normal;chr1_68991-70108.bed) 13s 3s - - 3.2 MB 92% 1.1 MB 499 bytes 0 bytes 16.0 KB 1
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