Error executing process > 'DAQ:SAMPLESHEET_CHECK_WF:SAMPLESHEET_CHECK (A2375WFLT3)'

Caused by:
  Process `DAQ:SAMPLESHEET_CHECK_WF:SAMPLESHEET_CHECK (A2375WFLT3)` terminated with an error exit status (1)


Command executed:

  # Create directory structure expected by sample_sheet_qc.py
  mkdir -p demux_output/Reports
  cp -r Adapter_Cycle_Metrics.csv Adapter_Metrics.csv Demultiplex_Detailed_Stats.csv Demultiplex_Stats.csv Demultiplex_Tile_Stats.csv IndexMetricsOut.bin Index_Hopping_Counts.csv Quality_Metrics.csv Quality_Tile_Metrics.csv RunInfo.xml SampleSheet.csv Top_Unknown_Barcodes.csv fastq_list.csv/* demux_output/Reports/
  
  sample_sheet_qc.py \
      demux_output \
      --fail-threshold 10.0 --warning-threshold 5.0 \
      --output-dir . \
      --create-pass-file
  
  cat <<-END_VERSIONS > versions.yml
  "DAQ:SAMPLESHEET_CHECK_WF:SAMPLESHEET_CHECK":
      sample_sheet_qc: 1.0.0
  END_VERSIONS

Command exit status:
  1

Command output:
  (empty)

Command error:
  cp: cannot stat 'fastq_list.csv/*': Not a directory

Work dir:
  s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/0f2db31f3fc94ad8e9083db43bc985

Container:
  292967571998.dkr.ecr.us-west-2.amazonaws.com/daq/samplesheet_check:1.0.0

Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`