File Info
- Filename
- 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_1sample_158b9a97-0528-1941__158b9a97--20260528-194103/variant_calling/manta_fusion/659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1/659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 7.7 KB
- Workflow Run
- fusion_v2_1sample_158b9a97-0528-1941
- Published
- May 28, 2026 1:11 PM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | BCAS3 | TBX2 | chr17 | 61026440 | chr17 | 61403081 | DEL | MantaDEL:0:128595:128596:0:0:0 | 0.924 | PASS | 0 | 0 | 0 | 0 | 388.0 | 0.42427680090754394 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | BRIP1 | . | chr17 | 61847138 | chr17 | 52903129 | BND | MantaBND:0:128663:128664:0:0:0:0 | 0.88 | PASS | 0 | 0 | 0 | 0 | 499.0 | 0.15665236051502146 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | NAALAD2 | . | chr11 | 90163344 | chr11 | 80947132 | DUP | MantaDUP:TANDEM:0:92557:92558:0:0:0 | 0.86 | PASS | 0 | 0 | 0 | 0 | 205.0 | 0.1886094674556213 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | CHCT1 | HEATR6 | chr17 | 60420370 | chr17 | 60050948 | DEL | MantaDEL:0:128439:128440:0:0:0 | 0.846 | PASS | 0 | 0 | 0 | 0 | 170.0 | 0.15260592425946756 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | KDM4C | ST6GALNAC1 | chr9 | 6929997 | chr17 | 76629525 | BND | MantaBND:0:130433:130434:0:0:0:0 | 0.772 | PASS | 0 | 0 | 0 | 0 | 124.0 | 0.09440175631174534 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | STARD10 | WASH6P | chr11 | 72781055 | chrX | 156025303 | BND | MantaBND:0:662:663:0:0:0:0 | 0.748 | PASS | 0 | 0 | 0 | 0 | 383.0 | 0.11650885137916839 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ST6GALNAC1 | . | chr17 | 76629597 | chr9 | 7486730 | BND | MantaBND:0:130433:130435:0:0:0:1 | 0.672 | PASS | 0 | 0 | 0 | 0 | 112.0 | 0.07375776397515528 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | CASKIN2 | TMEM94 | chr17 | 75501147 | chr17 | 75488729 | BND | MantaBND:0:130150:130151:0:0:0:1 | 0.564 | PASS | 0 | 0 | 0 | 0 | 76.0 | 0.033404406538734895 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ACTN3 | . | chr11 | 66546701 | chr11 | 68669811 | DEL | MantaDEL:0:91295:91296:0:0:0 | 0.52 | PASS | 0 | 0 | 0 | 0 | 772.0 | 0.4655984919886899 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | POLR2M | . | chr15 | 57714638 | chr15 | 77095840 | DEL | MantaDEL:46674:0:1:0:0:0 | 0.472 | PASS | 0 | 0 | 0 | 0 | 58.0 | 0.0546875 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | GDPD1 | PTRH2 | chr17 | 59221976 | chr17 | 59681440 | DEL | MantaDEL:0:128349:128350:0:0:0 | 0.388 | PASS | 0 | 0 | 0 | 0 | 39.0 | 0.010700909577314071 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | REG3A | REG3G | chr2 | 79158457 | chr2 | 79027082 | BND | MantaBND:0:19260:19261:1:0:0:0 | 0.322 | PASS | 0 | 0 | 0 | 0 | 912.0 | 0.07531380753138076 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | SMIM36 | TMEM94 | chr17 | 55508902 | chr17 | 75488874 | DUP | MantaDUP:TANDEM:0:130138:130139:0:0:0 | 0.314 | PASS | 0 | 0 | 0 | 0 | 59.0 | 0.04162330905306972 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | BOD1 | . | chr5 | 173609255 | chrUn_KN707729v1_decoy | 1 | BND | MantaBND:0:50722:50724:0:0:0:0 | 0.284 | PASS | 17 | 0 | 0 | 0 | 81.0 | 0.10174418604651163 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | TG | . | chr8 | 132908279 | chrUn_JTFH01000445v1_decoy | 1 | BND | MantaBND:0:73330:73331:0:0:0:0 | 0.262 | PASS | 0 | 0 | 0 | 0 | 67.0 | 0.0707070707070707 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | SPATC1L | . | chr21 | 46161561 | chr17 | 55247150 | BND | MantaBND:0:146569:147042:0:0:0:1 | 0.254 | PASS | 0 | 0 | 0 | 0 | 106.0 | 0.06483075157773953 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-A | . | chr6 | 29948202 | chr6 | 29893282 | DEL | MantaDEL:0:52502:52566:0:0:0 | 0.244 | PASS | 300 | 0 | 0 | 0 | 1382.0 | 0.37390797903319745 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | OR8G2P | . | chr11 | 124225123 | chr11 | 124238679 | DEL | MantaDEL:0:94233:94234:1:0:0 | 0.24 | PASS | 0 | 0 | 0 | 0 | 67.0 | 0.04734848484848485 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | RRP7A | . | chr22 | 42514292 | chr22 | 42576009 | DEL | MantaDEL:0:149950:149951:0:0:0 | 0.194 | PASS | 6 | 0 | 0 | 0 | 101.0 | 0.08445945945945946 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | DLG2 | INTS4 | chr11 | 84432360 | chr11 | 77956035 | DEL | MantaDEL:0:1078:1079:0:0:0 | 0.186 | PASS | 0 | 0 | 0 | 0 | 59.0 | 0.056519306099608285 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | OR5M3 | . | chr11 | 56470289 | chr11 | 56449005 | BND | MantaBND:0:89901:89902:1:0:0:1 | 0.17 | PASS | 0 | 0 | 0 | 0 | 165.0 | 0.12340425531914893 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-DRB5 | . | chr6 | 32518652 | chr6_GL000256v2_alt | 3899017 | BND | MantaBND:0:53451:53498:2:0:0:1 | 0.138 | FAIL | 952 | 0 | 0 | 0 | 66.0 | 0.06920415224913495 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | KIR2DS4 | KIR3DL1 | chr19 | 54847115 | chr19 | 54829414 | DEL | MantaDEL:0:140806:140807:0:0:0 | 0.114 | FAIL | 0 | 3 | 0 | 0 | 57.0 | 0.04700854700854701 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-F | THSD7B | chr6 | 29722954 | chr2 | 136890234 | BND | MantaBND:0:36992:52449:0:0:0:1 | 0.096 | FAIL | 46 | 0 | 0 | 0 | 54.0 | 0.02863202545068929 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-DRB1 | MACROH2A2 | chr6 | 32581577 | chr10 | 70083445 | BND | MantaBND:0:53494:53550:0:0:0:0 | 0.068 | FAIL | 553 | 0 | 0 | 0 | 166.0 | 0.0875 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-DRB1 | . | chr6 | 32589830 | chr6_GL000253v2_alt | 3855448 | BND | MantaBND:0:53438:53440:1:0:0:0 | 0.068 | FAIL | 466 | 0 | 0 | 0 | 274.0 | 0.10227272727272728 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MUC20 | . | chr3 | 195726281 | chr3 | 195619905 | DEL | MantaDEL:0:37149:37151:3:0:0 | 0.062 | FAIL | 6 | 0 | 0 | 0 | 81.0 | 0.03982300884955752 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PRKRIP1 | . | chr7 | 102380486 | chr7 | 102327180 | DUP | MantaDUP:TANDEM:0:65023:65024:1:0:0 | 0.048 | FAIL | 0 | 0 | 0 | 0 | 45.0 | 0.022857142857142857 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | BCR | . | chr22 | 23315875 | chr22 | 24259564 | BND | MantaBND:0:148161:148162:0:0:0:0 | 0.046 | FAIL | 0 | 0 | 0 | 0 | 418.0 | 0.2563764291996482 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-DQB1 | . | chr6 | 32659991 | chr6_GL000256v2_alt | 4057422 | BND | MantaBND:0:53843:53847:5:0:0:0 | 0.032 | FAIL | 710 | 0 | 0 | 0 | 128.0 | 0.04696969696969697 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | GNAQ | . | chr9 | 78031628 | chr2 | 131425309 | BND | MantaBND:0:21581:21582:3:0:0:1 | 0.028 | FAIL | 303 | 0 | 0 | 0 | 86.0 | 0.01329923273657289 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MUC6 | . | chr11 | 1017497 | chrUn_JTFH01000899v1_decoy | 484 | BND | MantaBND:0:87054:87058:9:5:0:0 | 0.024 | FAIL | 14 | 0 | 0 | 0 | 166.0 | 0.08806818181818182 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | HLA-DPB1 | . | chr6 | 33086640 | chr6_GL000251v2_alt | 4498497 | BND | MantaBND:0:52096:54076:16:0:0:0 | 0.02 | FAIL | 60 | 0 | 0 | 0 | 167.0 | 0.0584016393442623 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | KRTAP5-4 | . | chr11 | 1622017 | chr11_KI270903v1_alt | 106612 | BND | MantaBND:0:509:512:0:1:0:0 | 0.014 | FAIL | 1124 | 0 | 0 | 0 | 64.0 | 0.02626970227670753 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | GH1 | GH2 | chr17 | 63917411 | chr17 | 63880643 | DUP | MantaDUP:TANDEM:0:128953:128955:0:0:0 | 0.014 | FAIL | 0 | 0 | 0 | 0 | 53.0 | 0.009834050399508297 | 1 | 0 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | CSMD3 | RAB5A | chr8 | 112976133 | chr3 | 19975328 | BND | MantaBND:0:28716:28717:0:0:0:0 | 0.01 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.005428226779252111 | 1 | 1 | 0 |
| 659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | BAHCC1 | MSMO1 | chr17 | 81442831 | chr4 | 165329536 | BND | MantaBND:0:130905:130906:0:0:0:1 | 0.004 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.01125703564727955 | 1 | 1 | 0 |
38 rows