File Info
- Filename
- 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_158b9a97-0528-2218__158b9a97--20260528-221806/variant_calling/manta_fusion/659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1/659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion.fusion_calls.tsv
- Size
- 10.6 KB
- Workflow Run
- fusion_v2_220samples_158b9a97-0528-2218
- Published
- May 28, 2026 5:30 PM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | HLA-DPB1 | . | chr6 | 33086577 | chr6_GL000251v2_alt | 4498488 | BND | MantaBND:1:100747:390552:17:0:0:0 | 0.206 | PASS | 51 | 0 | 0 | 0 | 479.0 | 0.8518518518518519 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ATRX | MAGT1 | chrX | 77562348 | chrX | 77871176 | BND | MantaBND:1:975305:1010765:0:0:0:0 | 0.066 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.03862660944206009 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ALMS1 | EIF1AY | chr2 | 73596762 | chrY | 20589513 | BND | MantaBND:57825:0:1:0:0:0:0 | 0.064 | FAIL | 0 | 0 | 0 | 0 | 43.0 | 0.06206896551724138 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CENPK | . | chr5 | 65554898 | chr15 | 65221682 | BND | MantaBND:1:332342:332347:0:0:0:0 | 0.06 | FAIL | 0 | 0 | 0 | 0 | 39.0 | 0.03272727272727273 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BIRC6 | . | chr2 | 32493610 | chr2 | 35217223 | BND | MantaBND:1:109057:109060:0:0:0:0 | 0.058 | FAIL | 0 | 0 | 0 | 0 | 39.0 | 0.03169014084507042 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CNTNAP2 | PAK6 | chr7 | 146976588 | chr15 | 40272343 | BND | MantaBND:174325:0:1:0:0:0:0 | 0.048 | FAIL | 0 | 0 | 0 | 0 | 41.0 | 0.030201342281879196 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | TMEM132D | UBR1 | chr12 | 129508919 | chr15 | 42998265 | BND | MantaBND:200679:1:2:0:0:0:1 | 0.046 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.02088167053364269 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | OR4C15 | . | chr11 | 55554329 | chr11 | 55554187 | BND | MantaBND:206835:0:1:0:0:0:1 | 0.044 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.10227272727272728 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | P2RY1 | . | chr3 | 152836866 | chr3 | 154008788 | DUP | MantaDUP:TANDEM:1:240283:240288:0:0:0 | 0.038 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.02158273381294964 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CFAP47 | . | chrX | 36099758 | chrX | 4758548 | BND | MantaBND:247950:0:1:0:0:0:1 | 0.036 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.09333333333333334 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ADGRL4 | . | chr1 | 78893133 | chr4 | 72893216 | BND | MantaBND:1:28333:28343:0:0:0:1 | 0.032 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.01834862385321101 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | EPYC | OTOGL | chr12 | 91004235 | chr12 | 80336485 | DEL | MantaDEL:1:716871:716877:0:0:0 | 0.03 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.02452316076294278 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | KIF15 | . | chr3 | 44784860 | chr4 | 43710641 | BND | MantaBND:85746:1:5:0:0:0:0 | 0.026 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.049586776859504134 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | C14orf39 | RTL4 | chr14 | 60468466 | chrX | 112361585 | BND | MantaBND:217406:1:3:0:1:0:1 | 0.026 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.07142857142857142 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | GALC | . | chr14 | 87950665 | chr14 | 82137554 | BND | MantaBND:228021:0:1:0:0:0:0 | 0.026 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.03125 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | PDE8A | . | chr15 | 85115459 | chr15 | 85166995 | DEL | MantaDEL:1:821727:821735:0:0:0 | 0.026 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.034482758620689655 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NAE1 | . | chr16 | 66823592 | chr7 | 31389346 | BND | MantaBND:1:740920:845887:0:0:0:1 | 0.024 | FAIL | 0 | 0 | 0 | 0 | 43.0 | 0.038135593220338986 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FBXL13 | . | chr7 | 103027484 | chr7 | 103210560 | BND | MantaBND:1:343470:473950:0:2:0:1 | 0.022 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.03461538461538462 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ULBP1 | . | chr6 | 149969303 | chr6 | 150301152 | BND | MantaBND:1:431932:432072:0:0:0:1 | 0.02 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.0297029702970297 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BMX | ETNK1 | chrX | 15511484 | chr12 | 22673039 | BND | MantaBND:1:46586:689228:0:0:0:1 | 0.02 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.0297029702970297 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ANKRD44 | GTF3C3 | chr2 | 197026920 | chr2 | 196780594 | DUP | MantaDUP:TANDEM:23978:1:2:0:0:0 | 0.018 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.018442622950819672 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FAT4 | . | chr4 | 125451538 | chr4 | 188128722 | BND | MantaBND:1:53862:294162:0:0:0:0 | 0.018 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.017716535433070866 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ARHGAP19-SLIT1 | EPM2AIP1 | chr10 | 97210252 | chr3 | 36988241 | BND | MantaBND:1:202669:202688:0:0:0:1 | 0.016 | FAIL | 0 | 0 | 0 | 0 | 44.0 | 0.03515625 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | TRIM9 | . | chr14 | 51025265 | chr10 | 97725053 | BND | MantaBND:1:910611:910612:0:3:0:0 | 0.016 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.02284263959390863 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CFAP47 | DMD | chrX | 36160693 | chrX | 31952382 | BND | MantaBND:1:1004185:1004186:0:0:0:1 | 0.016 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.0297029702970297 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AKAP3 | TENT5C | chr12 | 4624824 | chr1 | 117627845 | BND | MantaBND:1:17799:30489:0:9:0:0 | 0.014 | FAIL | 0 | 68 | 0 | 0 | 182.0 | 0.0856958762886598 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | EGFR | ZC3H12C | chr7 | 55205003 | chr11 | 110125297 | BND | MantaBND:1:10538:245712:0:5:0:1 | 0.014 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.06191369606003752 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | LHFPL3 | NHLRC2 | chr7 | 104490092 | chr10 | 113858627 | BND | MantaBND:1:611998:613402:0:0:0:0 | 0.012 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.024128686327077747 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | WT1 | . | chr11 | 32388004 | chr18 | 4950322 | BND | MantaBND:1:11310:29812:0:6:0:0 | 0.012 | FAIL | 1775 | 0 | 0 | 0 | 77.0 | 0.05203816131830009 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BRD4 | RERG | chr19 | 15247631 | chr12 | 15214105 | BND | MantaBND:1:29683:133428:0:2:0:0 | 0.012 | FAIL | 0 | 0 | 0 | 0 | 57.0 | 0.00844475721323012 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FAM120AOS | . | chr9 | 93447654 | chr2 | 62588461 | BND | MantaBND:1:560936:560942:0:0:0:1 | 0.008 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.02643171806167401 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ACOXL | . | chr2 | 110768462 | chr8 | 49035934 | BND | MantaBND:1:24363:130791:0:4:0:0 | 0.008 | FAIL | 336 | 0 | 0 | 0 | 30.0 | 0.007601935038009675 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NAV1 | TENT5C | chr1 | 201821511 | chr1 | 117626696 | BND | MantaBND:1:17700:79132:0:1:0:0 | 0.006 | FAIL | 0 | 9 | 0 | 0 | 138.0 | 0.029567854435178165 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | . | chr18 | 63128464 | chr3 | 18481927 | BND | MantaBND:1:14620:98842:0:0:0:1 | 0.006 | FAIL | 2 | 0 | 0 | 0 | 111.0 | 0.030626780626780627 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FANCB | TP63 | chrX | 14850604 | chr3 | 189699098 | BND | MantaBND:65094:1:5:0:0:0:0 | 0.006 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.044444444444444446 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FBXW7 | SMCO4 | chr4 | 152322262 | chr11 | 93504909 | BND | MantaBND:1:300269:300559:0:7:0:0 | 0.006 | FAIL | 98 | 0 | 0 | 0 | 36.0 | 0.009433962264150943 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NOTCH3 | . | chr19 | 15187467 | chr6 | 168405008 | BND | MantaBND:1:930774:930788:0:1:0:1 | 0.006 | FAIL | 17 | 0 | 0 | 0 | 78.0 | 0.020224719101123594 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | CWF19L2 | chr18 | 63128464 | chr11 | 107330645 | BND | MantaBND:1:14620:40030:0:1:0:1 | 0.006 | FAIL | 2 | 0 | 0 | 0 | 110.0 | 0.03021978021978022 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | FRMD5 | chr18 | 63128464 | chr15 | 43952040 | BND | MantaBND:1:14620:47533:0:0:0:0 | 0.006 | FAIL | 2 | 0 | 0 | 0 | 92.0 | 0.028668941979522185 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | INTS6L | chr18 | 63128464 | chrX | 135575826 | BND | MantaBND:1:14620:65495:0:0:0:1 | 0.006 | FAIL | 2 | 0 | 0 | 0 | 110.0 | 0.03335919317300233 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | MYB | . | chr6 | 135206780 | chr12 | 105998681 | BND | MantaBND:1:419656:424969:0:0:0:1 | 0.004 | FAIL | 3 | 0 | 0 | 0 | 35.0 | 0.024390243902439025 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ALPK2 | BCL2 | chr18 | 58502135 | chr18 | 63128464 | BND | MantaBND:1:14620:64210:0:0:0:1 | 0.004 | FAIL | 0 | 2 | 0 | 0 | 110.0 | 0.02719797596457938 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ATP8B3 | LPP | chr19 | 1795897 | chr3 | 188664666 | BND | MantaBND:1:5587:256394:0:4:0:0 | 0.002 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.006644518272425249 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | SGCD | chr18 | 63128464 | chr5 | 156287669 | BND | MantaBND:1:14620:317161:0:0:0:1 | 0.002 | FAIL | 2 | 0 | 0 | 0 | 93.0 | 0.030758226037195996 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | KIF13A | chr18 | 63128464 | chr6 | 17858141 | BND | MantaBND:1:14620:384808:0:1:0:1 | 0.002 | FAIL | 2 | 0 | 0 | 0 | 111.0 | 0.030868628858578606 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | DOCK5 | NTRK3 | chr8 | 25391198 | chr15 | 88059051 | BND | MantaBND:1:5703:405075:0:8:0:1 | 0.002 | FAIL | 0 | 1484 | 0 | 0 | 38.0 | 0.05617352614015573 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | TMTC2 | chr18 | 63128464 | chr12 | 83055744 | BND | MantaBND:1:14620:95282:0:0:0:1 | 0.002 | FAIL | 2 | 0 | 0 | 0 | 93.0 | 0.030868628858578606 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | FRMPD3 | chr18 | 63128464 | chrX | 107531112 | BND | MantaBND:1:14620:245890:0:0:0:0 | 0.002 | FAIL | 2 | 0 | 0 | 0 | 93.0 | 0.0301941049604601 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | TENT5C | . | chr1 | 117626696 | chr2 | 19621974 | BND | MantaBND:1:17700:104371:0:0:0:1 | 0.0 | FAIL | 9 | 0 | 0 | 0 | 137.0 | 0.029133284777858703 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NTRK3 | . | chr15 | 88059050 | chr2 | 154574631 | BND | MantaBND:1:5703:123267:0:8:0:0 | 0.0 | FAIL | 1484 | 0 | 0 | 0 | 31.0 | 0.05109862033725089 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | IGF1 | KDM5A | chr12 | 102402395 | chr12 | 352185 | BND | MantaBND:1:668897:669041:0:0:0:0 | 0.0 | FAIL | 6 | 0 | 0 | 0 | 34.0 | 0.005917159763313609 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | CIT | chr18 | 63128465 | chr12 | 119845944 | BND | MantaBND:1:14620:19970:0:0:0:0 | 0.0 | FAIL | 2 | 0 | 0 | 0 | 89.0 | 0.028515878159429683 | 1 | 1 | 0 |
53 rows