File Info
- Filename
- 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_158b9a97-0528-2218__158b9a97--20260528-221806/variant_calling/manta_fusion/659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1/659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 9.7 KB
- Workflow Run
- fusion_v2_220samples_158b9a97-0528-2218
- Published
- May 28, 2026 5:42 PM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MAB21L1 | TBP | chr13 | 35476375 | chr6 | 170562053 | BND | MantaBND:2:104572:348012:3:0:0:1 | 0.226 | PASS | 2 | 61 | 0 | 0 | 131.0 | 0.08133971291866028 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | KIR2DS4 | KIR3DL2 | chr19 | 54835225 | chr19 | 54851245 | DEL | MantaDEL:2:950345:950352:0:0:0 | 0.086 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.15217391304347827 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | HMMR | SLIT3 | chr5 | 163484095 | chr5 | 169031398 | DUP | MantaDUP:TANDEM:2:392164:392571:0:0:0 | 0.046 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.018556701030927835 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | HLA-DRB5 | MACROH2A2 | chr6 | 32519404 | chr10 | 70083471 | BND | MantaBND:2:408600:408667:0:0:0:1 | 0.04 | FAIL | 1002 | 0 | 0 | 0 | 100.0 | 0.05909090909090909 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TBC1D32 | . | chr6 | 121304775 | chr6 | 121355685 | BND | MantaBND:2:436203:436215:0:0:0:0 | 0.038 | FAIL | 0 | 0 | 0 | 0 | 37.0 | 0.0182370820668693 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ACRV1 | FARP1 | chr11 | 125676932 | chr13 | 98376696 | BND | MantaBND:2:681272:681276:0:0:0:1 | 0.032 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.031746031746031744 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | DEUP1 | ZNF587B | chr11 | 93412741 | chr19 | 57841423 | BND | MantaBND:2:946878:947816:0:0:0:1 | 0.03 | FAIL | 0 | 5 | 0 | 0 | 56.0 | 0.022792022792022793 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CD2AP | CDC42BPB | chr6 | 47582003 | chr14 | 103027037 | BND | MantaBND:2:635287:635291:0:0:0:1 | 0.026 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.03202846975088968 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ARNT2 | BCL2 | chr15 | 80444570 | chr18 | 63128464 | BND | MantaBND:2:12049:82075:0:0:0:1 | 0.026 | FAIL | 0 | 2 | 0 | 0 | 146.0 | 0.03170731707317073 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MSH3 | . | chr5 | 80775695 | chr5 | 57768922 | BND | MantaBND:2:369351:369354:0:1:0:1 | 0.024 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.019271948608137045 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ABCA12 | SPAG16 | chr2 | 214989358 | chr2 | 213686947 | BND | MantaBND:2:208717:208718:0:0:0:1 | 0.022 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.0189873417721519 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ZFHX3 | . | chr16 | 72787736 | chr14 | 104300990 | BND | MantaBND:2:166734:343742:0:2:0:0 | 0.022 | FAIL | 1200 | 0 | 0 | 0 | 34.0 | 0.0324 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | B3GNT5 | CACNA1A | chr3 | 183270240 | chr19 | 13598275 | BND | MantaBND:2:286169:286177:0:0:0:1 | 0.02 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.02452316076294278 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MYH4 | . | chr17 | 10456537 | chr4 | 35937627 | BND | MantaBND:2:302945:302947:0:0:0:0 | 0.018 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.013888888888888888 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | RNMT | . | chr18 | 13741624 | chr18 | 51829618 | BND | MantaBND:293788:0:1:0:0:0:1 | 0.018 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.018480492813141684 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | VEZF1 | . | chr17 | 57979244 | chr6 | 78249879 | BND | MantaBND:2:476794:476796:0:8:0:1 | 0.016 | FAIL | 151 | 0 | 0 | 0 | 86.0 | 0.09196645929131729 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SAMD12 | . | chr8 | 118379571 | chr8 | 118172893 | BND | MantaBND:2:549289:549292:0:0:0:1 | 0.016 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.009852216748768473 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | IKZF3 | SPNS2 | chr17 | 39765493 | chr17 | 4503918 | BND | MantaBND:2:872681:873693:0:1:0:0 | 0.014 | FAIL | 0 | 0 | 0 | 0 | 47.0 | 0.008888888888888889 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NEGR1 | . | chr1 | 71404552 | chr2 | 234345299 | BND | MantaBND:2:20042:219334:0:3:0:1 | 0.012 | FAIL | 2 | 0 | 0 | 0 | 129.0 | 0.10377358490566038 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ALS2 | SEPTIN12 | chr2 | 201762069 | chr16 | 4785859 | BND | MantaBND:2:322596:323650:0:0:0:0 | 0.012 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.015306122448979591 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | THSD7B | chr17 | 72125896 | chr2 | 136888982 | BND | MantaBND:2:34471:175400:0:0:0:0 | 0.01 | FAIL | 14 | 0 | 0 | 0 | 95.0 | 0.021621621621621623 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CEP85L | SETD2 | chr6 | 118709550 | chr3 | 47101598 | BND | MantaBND:2:8337:60580:0:5:0:1 | 0.01 | FAIL | 0 | 1139 | 0 | 0 | 81.0 | 0.038260169150221505 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CCDC7 | PTEN | chr10 | 32850805 | chr10 | 87971587 | BND | MantaBND:2:8190:46342:0:4:0:0 | 0.01 | FAIL | 0 | 22 | 0 | 0 | 40.0 | 0.035897435897435895 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | . | chr17 | 72125896 | chr1 | 105302374 | BND | MantaBND:2:34471:50274:0:1:0:1 | 0.006 | FAIL | 14 | 0 | 0 | 0 | 93.0 | 0.021994134897360705 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NCKAP5 | PTPRD | chr2 | 132782288 | chr9 | 10418547 | BND | MantaBND:2:173115:173122:0:2:0:0 | 0.006 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.00672834314550042 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ATM | . | chr11 | 108303026 | chr2 | 163905273 | BND | MantaBND:2:265798:675177:0:0:0:0 | 0.006 | FAIL | 0 | 0 | 0 | 0 | 41.0 | 0.011764705882352941 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | GLI2 | SOX9 | chr2 | 120983979 | chr17 | 72125896 | BND | MantaBND:2:34471:51735:0:1:0:0 | 0.004 | FAIL | 0 | 14 | 0 | 0 | 92.0 | 0.020202020202020204 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ROBO2 | SOX9 | chr3 | 77474658 | chr17 | 72125896 | BND | MantaBND:2:34471:186622:0:0:0:1 | 0.004 | FAIL | 0 | 14 | 0 | 0 | 96.0 | 0.020774647887323944 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | FARS2 | NCOA3 | chr6 | 5301792 | chr20 | 47654875 | BND | MantaBND:2:4164:129428:0:3:0:0 | 0.004 | FAIL | 0 | 220 | 0 | 0 | 69.0 | 0.035794183445190156 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CD109 | SOX9 | chr6 | 73808844 | chr17 | 72125896 | BND | MantaBND:2:34471:45832:0:1:0:0 | 0.004 | FAIL | 0 | 14 | 0 | 0 | 94.0 | 0.020176082171680116 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MYB | . | chr6 | 135205702 | chr6 | 131926889 | BND | MantaBND:2:66615:440700:0:0:0:1 | 0.004 | FAIL | 2 | 0 | 0 | 0 | 51.0 | 0.0129366106080207 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TGFBR1 | . | chr9 | 99151449 | chr19 | 21698119 | BND | MantaBND:2:22075:582495:0:4:0:1 | 0.004 | FAIL | 7 | 0 | 0 | 0 | 50.0 | 0.009652509652509652 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NOS1 | SOX9 | chr12 | 117438364 | chr17 | 72125896 | BND | MantaBND:2:34471:454231:0:1:0:0 | 0.004 | FAIL | 0 | 14 | 0 | 0 | 95.0 | 0.020260989010989012 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | THSD4 | chr17 | 72125897 | chr15 | 71395915 | BND | MantaBND:2:34471:102441:0:1:0:0 | 0.004 | FAIL | 14 | 0 | 0 | 0 | 92.0 | 0.02125506072874494 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CNOT1 | PLCG2 | chr16 | 58577949 | chr16 | 81854612 | BND | MantaBND:2:838673:850382:0:1:0:1 | 0.004 | FAIL | 0 | 0 | 0 | 0 | 37.0 | 0.004176334106728539 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MAX | . | chr14 | 65102490 | chr1 | 179723524 | BND | MantaBND:2:74570:90818:0:3:0:0 | 0.002 | FAIL | 45 | 0 | 0 | 0 | 60.0 | 0.017710583153347732 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | FGFR2 | . | chr10 | 121577312 | chr4 | 160198093 | BND | MantaBND:2:40135:633787:0:7:0:0 | 0.002 | FAIL | 37 | 0 | 0 | 0 | 36.0 | 0.001978891820580475 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CHD2 | NCR2 | chr15 | 93020715 | chr6 | 41338636 | BND | MantaBND:2:65529:822614:0:1:0:1 | 0.002 | FAIL | 5 | 0 | 0 | 0 | 41.0 | 0.0040100250626566416 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | ZNF777 | chr17 | 72125897 | chr7 | 149442275 | BND | MantaBND:2:34471:60181:0:0:0:1 | 0.002 | FAIL | 14 | 0 | 0 | 0 | 95.0 | 0.02050359712230216 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | RELA | . | chr11 | 65662375 | chr11 | 90241578 | DEL | MantaDEL:2:660760:660761:0:1:0 | 0.002 | FAIL | 5 | 0 | 0 | 0 | 39.0 | 0.002777777777777778 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | DPH6 | MAX | chr15 | 35491549 | chr14 | 65102486 | BND | MantaBND:2:56468:90818:0:2:0:1 | 0.002 | FAIL | 0 | 45 | 0 | 0 | 60.0 | 0.01658868566567418 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | IGF1R | MIGA1 | chr15 | 98963045 | chr1 | 77803766 | BND | MantaBND:2:298334:823105:0:6:0:0 | 0.0 | FAIL | 4 | 0 | 0 | 0 | 39.0 | 0.003838771593090211 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | PRKCE | TENT5C | chr2 | 45862184 | chr1 | 117627845 | BND | MantaBND:2:21149:139671:0:1:0:0 | 0.0 | FAIL | 0 | 68 | 0 | 0 | 59.0 | 0.021712412945514133 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CDC42BPA | SOX9 | chr1 | 227256949 | chr17 | 72125897 | BND | MantaBND:2:34471:117620:0:1:0:0 | 0.0 | FAIL | 0 | 14 | 0 | 0 | 93.0 | 0.01975736568457539 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | BRAF | . | chr7 | 140787394 | chr3 | 99257121 | BND | MantaBND:2:138092:486832:0:6:0:1 | 0.0 | FAIL | 112 | 0 | 0 | 0 | 37.0 | 0.007226738934056007 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | AR | PTPRK | chrX | 67710101 | chr6 | 128329410 | BND | MantaBND:2:4642:186055:0:4:0:0 | 0.0 | FAIL | 57 | 0 | 0 | 0 | 83.0 | 0.019095477386934675 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CPM | SOX9 | chr12 | 68941204 | chr17 | 72125896 | BND | MantaBND:2:15777:34471:0:3:0:0 | 0.0 | FAIL | 0 | 14 | 0 | 0 | 93.0 | 0.022091310751104567 | 1 | 1 | 0 |
48 rows