File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/14dd0df1cddd7afb52f63138df58fa/.command.log
Size
887 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bl1-N1-BDNA-1_A23TY32LT4_1)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260427_LH00519_0087_A23TY32LT4__manual_run_31e2bab--20260430-043425/alignments/recalibrated/659_bl1-N1-BDNA-1_A23TY32LT4_1/659_bl1-N1-BDNA-1_A23TY32LT4_1.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/14dd0df1cddd7afb52f63138df58fa/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/14dd0df1cddd7afb52f63138df58fa/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260427_LH00519_0087_A23TY32LT4__manual_run_31e2bab--20260430-043425/alignments/recalibrated/659_bl1-N1-BDNA-1_A23TY32LT4_1/659_bl1-N1-BDNA-1_A23TY32LT4_1.recalibrated.bam
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: 659_bl1-N1-BDNA-1_A23TY32LT4_1.recalibrated.bam.bai