Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/ea5f45f4127464020cfc4a2f849d36/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/f69ca38de87a2487741a9757e98291/659_bPW-T1-TDNA-1_A23FG3YLT4_1_vs_659_bPW-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.somatic_sv.scored.vcf.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/ea5f45f4127464020cfc4a2f849d36/.command.run
==> STAGING COMPLETE (3 inputs)
[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header