File Info
- Filename
- 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_4a6091e8-0531-2019__4a6091e8--20260531-201947/variant_calling/manta_fusion/659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1/659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 9.1 KB
- Workflow Run
- fusion_v2_220samples_4a6091e8-0531-2019
- Published
- May 31, 2026 8:20 PM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TBC1D32 | . | chr6 | 121304775 | chr6 | 121355685 | BND | MantaBND:2:436203:436215:0:0:0:0 | 0.03793940703995304 | PASS | 0 | 0 | 0 | 0 | 37.0 | 0.0182370820668693 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MAB21L1 | TBP | chr13 | 35476375 | chr6 | 170562053 | BND | MantaBND:2:104572:348012:3:0:0:1 | 0.00430360090074987 | PASS | 2 | 61 | 0 | 0 | 131.0 | 0.08133971291866028 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | HMMR | SLIT3 | chr5 | 163484095 | chr5 | 169031398 | DUP | MantaDUP:TANDEM:2:392164:392571:0:0:0 | 0.0020646541727345046 | PASS | 0 | 0 | 0 | 0 | 33.0 | 0.018556701030927835 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | B3GNT5 | CACNA1A | chr3 | 183270240 | chr19 | 13598275 | BND | MantaBND:2:286169:286177:0:0:0:1 | 0.0005995477862663133 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.02452316076294278 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | KIR2DS4 | KIR3DL2 | chr19 | 54835225 | chr19 | 54851245 | DEL | MantaDEL:2:950345:950352:0:0:0 | 0.0004242851551138773 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.15217391304347827 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | VEZF1 | . | chr17 | 57979244 | chr6 | 78249879 | BND | MantaBND:2:476794:476796:0:8:0:1 | 0.00038070276357684825 | FAIL | 151 | 0 | 0 | 0 | 86.0 | 0.09196645929131729 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | DEUP1 | ZNF587B | chr11 | 93412741 | chr19 | 57841423 | BND | MantaBND:2:946878:947816:0:0:0:1 | 0.00037925423202244345 | FAIL | 0 | 5 | 0 | 0 | 56.0 | 0.022792022792022793 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ACRV1 | FARP1 | chr11 | 125676932 | chr13 | 98376696 | BND | MantaBND:2:681272:681276:0:0:0:1 | 0.00019165217907022642 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.031746031746031744 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MYB | . | chr6 | 135205702 | chr6 | 131926889 | BND | MantaBND:2:66615:440700:0:0:0:1 | 6.364950507564587e-05 | FAIL | 2 | 0 | 0 | 0 | 51.0 | 0.0129366106080207 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | RNMT | . | chr18 | 13741624 | chr18 | 51829618 | BND | MantaBND:293788:0:1:0:0:0:1 | 5.9472157547640646e-05 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.018480492813141684 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ABCA12 | SPAG16 | chr2 | 214989358 | chr2 | 213686947 | BND | MantaBND:2:208717:208718:0:0:0:1 | 5.677623126681783e-05 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.0189873417721519 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ALS2 | SEPTIN12 | chr2 | 201762069 | chr16 | 4785859 | BND | MantaBND:2:322596:323650:0:0:0:0 | 5.471756379760986e-05 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.015306122448979591 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CD2AP | CDC42BPB | chr6 | 47582003 | chr14 | 103027037 | BND | MantaBND:2:635287:635291:0:0:0:1 | 5.384870320741166e-05 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.03202846975088968 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SAMD12 | . | chr8 | 118379571 | chr8 | 118172893 | BND | MantaBND:2:549289:549292:0:0:0:1 | 4.956815273090468e-05 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.009852216748768473 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ROS1 | . | chr6 | 117325960 | chr7 | 23086301 | BND | MantaBND:2:35616:434053:0:8:0:0 | 4.151660481826674e-05 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.007853403141361256 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MSH3 | . | chr5 | 80775695 | chr5 | 57768922 | BND | MantaBND:2:369351:369354:0:1:0:1 | 2.522391764094268e-05 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.019271948608137045 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | HLA-DRB5 | MACROH2A2 | chr6 | 32519404 | chr10 | 70083471 | BND | MantaBND:2:408600:408667:0:0:0:1 | 1.5082766704240083e-05 | FAIL | 1002 | 0 | 0 | 0 | 100.0 | 0.05909090909090909 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | RELA | . | chr11 | 65662375 | chr11 | 90241578 | DEL | MantaDEL:2:660760:660761:0:1:0 | 1.4971214910454588e-05 | FAIL | 5 | 0 | 0 | 0 | 39.0 | 0.002777777777777778 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRG1 | PLB1 | chr8 | 32640246 | chr2 | 28601499 | BND | MantaBND:2:2024:135667:0:7:0:1 | 1.3940204431518253e-05 | FAIL | 1673 | 0 | 0 | 0 | 90.0 | 0.019095060190950603 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MYH4 | . | chr17 | 10456537 | chr4 | 35937627 | BND | MantaBND:2:302945:302947:0:0:0:0 | 1.3517294336848224e-05 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.013888888888888888 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | IKZF3 | SPNS2 | chr17 | 39765493 | chr17 | 4503918 | BND | MantaBND:2:872681:873693:0:1:0:0 | 1.1910281224464075e-05 | FAIL | 0 | 0 | 0 | 0 | 47.0 | 0.008888888888888889 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CLCN5 | NRG1 | chrX | 50007474 | chr8 | 32640246 | BND | MantaBND:2:2024:174464:0:6:0:0 | 1.1547871792061275e-05 | FAIL | 0 | 1673 | 0 | 0 | 63.0 | 0.018620397799407534 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CNOT1 | PLCG2 | chr16 | 58577949 | chr16 | 81854612 | BND | MantaBND:2:838673:850382:0:1:0:1 | 1.0957954603738515e-05 | FAIL | 0 | 0 | 0 | 0 | 37.0 | 0.004176334106728539 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRAS | . | chr1 | 114704552 | chr1 | 114704094 | DUP | MantaDUP:TANDEM:2:56712:56712:14:1:0 | 1.0503360679969638e-05 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.015047879616963064 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRG1 | . | chr8 | 32640247 | chr4 | 17192514 | BND | MantaBND:2:2024:96573:0:8:0:0 | 9.766961013229956e-06 | FAIL | 1673 | 0 | 0 | 0 | 69.0 | 0.020588235294117647 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NTRK3 | . | chr15 | 87941496 | chr9 | 84640587 | BND | MantaBND:2:1979:66853:0:8:0:1 | 9.738616426929346e-06 | FAIL | 377 | 0 | 0 | 0 | 36.0 | 0.013218235770164554 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ATM | . | chr11 | 108303026 | chr2 | 163905273 | BND | MantaBND:2:265798:675177:0:0:0:0 | 9.603874719837808e-06 | FAIL | 0 | 0 | 0 | 0 | 41.0 | 0.011764705882352941 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NEGR1 | . | chr1 | 71404552 | chr2 | 234345299 | BND | MantaBND:2:20042:219334:0:3:0:1 | 8.422392824860937e-06 | FAIL | 2 | 0 | 0 | 0 | 129.0 | 0.10377358490566038 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | . | chr17 | 72125896 | chr3 | 49790228 | BND | MantaBND:2:34471:106038:0:1:0:1 | 7.716751326983931e-06 | FAIL | 14 | 0 | 0 | 0 | 95.0 | 0.01916376306620209 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CHD2 | NCR2 | chr15 | 93020715 | chr6 | 41338636 | BND | MantaBND:2:65529:822614:0:1:0:1 | 7.692050894851446e-06 | FAIL | 5 | 0 | 0 | 0 | 41.0 | 0.0040100250626566416 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | THSD7B | chr17 | 72125896 | chr2 | 136888982 | BND | MantaBND:2:34471:175400:0:0:0:0 | 4.465919466727269e-06 | FAIL | 14 | 0 | 0 | 0 | 95.0 | 0.021621621621621623 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | YAP1 | . | chr11 | 102233374 | chr11 | 102233516 | BND | MantaBND:2:277180:277180:331:5:0:1 | 4.255302741448036e-06 | FAIL | 2 | 0 | 0 | 0 | 37.0 | 0.009950248756218905 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRG1 | RBFOX1 | chr8 | 32640246 | chr16 | 7410832 | BND | MantaBND:2:2024:830181:0:7:0:1 | 4.137137269039533e-06 | FAIL | 1673 | 0 | 0 | 0 | 79.0 | 0.019940602460755196 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | BARD1 | . | chr2 | 214725701 | chr2 | 214725553 | BND | MantaBND:2:99858:99858:19:4:0:0 | 3.822266447972977e-06 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.008466603951081843 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | BRAF | . | chr7 | 140787394 | chr3 | 99257121 | BND | MantaBND:2:138092:486832:0:6:0:1 | 3.6047576402863876e-06 | FAIL | 112 | 0 | 0 | 0 | 37.0 | 0.007226738934056007 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRG1 | NUP98 | chr8 | 32640246 | chr11 | 3720977 | BND | MantaBND:2:2024:30135:0:8:0:1 | 3.2215203426138027e-06 | FAIL | 1673 | 8 | 0 | 0 | 86.0 | 0.026905829596412557 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRG1 | PIAS1 | chr8 | 32640246 | chr15 | 68114060 | BND | MantaBND:2:2024:272827:0:7:0:1 | 2.8234866936181876e-06 | FAIL | 1673 | 0 | 0 | 0 | 83.0 | 0.0215633423180593 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TET1 | . | chr10 | 68694061 | chr10 | 68694628 | BND | MantaBND:2:101720:101720:350:0:0:0 | 2.3222200370038516e-06 | FAIL | 7 | 95 | 0 | 0 | 33.0 | 0.007894736842105263 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | IGF1R | MIGA1 | chr15 | 98963045 | chr1 | 77803766 | BND | MantaBND:2:298334:823105:0:6:0:0 | 1.7647101175460165e-06 | FAIL | 4 | 0 | 0 | 0 | 39.0 | 0.003838771593090211 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | FGFR2 | . | chr10 | 121577312 | chr4 | 160198093 | BND | MantaBND:2:40135:633787:0:7:0:0 | 1.5552206086325055e-06 | FAIL | 37 | 0 | 0 | 0 | 36.0 | 0.001978891820580475 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TGFBR1 | . | chr9 | 99151449 | chr19 | 21698119 | BND | MantaBND:2:22075:582495:0:4:0:1 | 4.38645503300031e-07 | FAIL | 7 | 0 | 0 | 0 | 50.0 | 0.009652509652509652 | 1 | 1 | 0 |
42 rows