Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/feb5cca1f8897799a5ed11c8b3fb66/659_esc-T1-TDNA-1_A23FG3YLT4_1_vs_659_esc-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.somatic_sv.scored.vcf.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/94b9a49e904ffcb1d926da8c230bb2/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/94b9a49e904ffcb1d926da8c230bb2/.command.run
==> STAGING COMPLETE (3 inputs)
[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header