File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/5abe5ea200d0fc6d0509777e36ebef/.command.log
Size
610 bytes
Task
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (659_dAn-T1-TDNA-1_B23MHVMLT4_1_vs_659_dAn-N1-BDNA-1_B23L5TMLT4_1;manta_fusion)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/5d06150f23f7e3fb3b86067a659181/659_dAn-T1-TDNA-1_B23MHVMLT4_1_vs_659_dAn-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/5abe5ea200d0fc6d0509777e36ebef/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/5abe5ea200d0fc6d0509777e36ebef/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header