File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/c7b984c2391235dc4c40ef8bab458b/.command.log
Size
618 bytes
Task
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (1173_CRL-T1-TDNA-SLD-01_A23T7FVLT4_1_vs_1173_CRL-N1-BDNA-01_A23MHW3LT4_1;manta_fusion)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/08f477d3c152d5ce89e77edf6d8598/1173_CRL-T1-TDNA-SLD-01_A23T7FVLT4_1_vs_1173_CRL-N1-BDNA-01_A23MHW3LT4_1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/c7b984c2391235dc4c40ef8bab458b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/c7b984c2391235dc4c40ef8bab458b/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header