File Info
- Filename
- 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_90a6e5e8-0605-1411__90a6e5e8--20260605-141149/variant_calling/manta_fusion/659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1/659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 6.2 KB
- Workflow Run
- fusion_v2_220samples_90a6e5e8-0605-1411
- Published
- Jun 05, 2026 7:35 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | SHPRH | . | chr6 | 145921206 | chr6 | 131777233 | BND | MantaBND:3:46574:46575:0:0:0:0 | 0.9999863394883576 | PASS | 0 | 0 | 0 | 0 | 231.0 | 0.1930651872399445 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PLA2R1 | . | chr2 | 159987227 | chr10 | 108724744 | BND | MantaBND:3:17209:17210:0:0:0:0 | 0.9999495818857279 | PASS | 0 | 0 | 0 | 0 | 161.0 | 0.1247086247086247 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ARID1B | FNDC1 | chr6 | 156970581 | chr6 | 159234075 | DEL | MantaDEL:3:47637:47639:0:3:0 | 0.9999296615224456 | PASS | 0 | 0 | 0 | 0 | 139.0 | 0.2126126126126126 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MRPL12 | . | chr17 | 81704375 | chr8 | 20992144 | BND | MantaBND:24221:0:1:0:0:0:1 | 0.9999205657387438 | PASS | 0 | 0 | 0 | 0 | 59.0 | 0.03982300884955752 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | NOL11 | STXBP5 | chr17 | 67726600 | chr6 | 147284551 | BND | MantaBND:3:100888:100889:0:0:0:0 | 0.9998690455009991 | PASS | 0 | 0 | 0 | 0 | 176.0 | 0.14056939501779359 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | CD63 | SLC2A12 | chr12 | 55725605 | chr6 | 134010734 | BND | MantaBND:3:76844:76845:0:0:0:1 | 0.9998580903103693 | PASS | 0 | 0 | 0 | 0 | 95.0 | 0.08883306691025349 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | OR4D6 | . | chr11 | 59457042 | chr11 | 59455808 | DUP | MantaDUP:TANDEM:3:70497:70498:0:0:0 | 0.9998108122310378 | PASS | 0 | 0 | 0 | 0 | 222.0 | 0.20611916264090177 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ITGA5 | . | chr12 | 54396330 | chr12 | 55662311 | BND | MantaBND:3:76609:76610:0:0:0:1 | 0.9996743804424421 | PASS | 0 | 0 | 0 | 0 | 181.0 | 0.09348020244120274 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | CPM | . | chr12 | 68867016 | chr12 | 63181447 | BND | MantaBND:3:78215:78216:1:0:0:0 | 0.9996446414241497 | PASS | 0 | 0 | 0 | 0 | 35.0 | 0.008113747005640985 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | STXBP5 | . | chr6 | 147316283 | chr12 | 60412448 | BND | MantaBND:3:46696:46697:0:0:0:1 | 0.9995190224857982 | PASS | 0 | 0 | 0 | 0 | 61.0 | 0.03700255992552944 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PTPRR | TMTC2 | chr12 | 70892789 | chr12 | 82940475 | BND | MantaBND:3:78540:78541:0:0:0:1 | 0.999472353924559 | PASS | 0 | 0 | 0 | 0 | 840.0 | 0.3909162509845104 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PLA2R1 | . | chr2 | 159987227 | chr10 | 121610814 | BND | MantaBND:3:17209:17214:0:0:0:0 | 0.999462407471664 | PASS | 0 | 0 | 0 | 0 | 141.0 | 0.10882708585247884 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MSRB3 | SRGAP1 | chr12 | 65427406 | chr12 | 64097321 | DEL | MantaDEL:3:77831:77832:0:2:0 | 0.9993063502179973 | PASS | 0 | 0 | 0 | 0 | 149.0 | 0.10812064965197216 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | SHPRH | . | chr6 | 145947590 | chr6 | 155357884 | DUP | MantaDUP:TANDEM:3:46595:46596:0:0:0 | 0.9992569838459628 | PASS | 0 | 0 | 0 | 0 | 50.0 | 0.01774860199367858 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MAP3K12 | RAB11FIP4 | chr12 | 53493026 | chr17 | 31517687 | BND | MantaBND:3:97918:97919:0:0:0:1 | 0.9991834828520406 | PASS | 0 | 0 | 0 | 0 | 73.0 | 0.04195804195804196 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | CD300LF | ITGA11 | chr17 | 74703050 | chr15 | 68386695 | BND | MantaBND:36981:0:1:0:0:0:1 | 0.9990307586875172 | PASS | 0 | 0 | 0 | 0 | 43.0 | 0.013745704467353952 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MDM2 | . | chr12 | 68809067 | chr12 | 65636127 | DEL | MantaDEL:3:78135:78138:0:0:0 | 0.9984111188812587 | PASS | 0 | 0 | 0 | 0 | 34.0 | 0.0013869912640251728 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | LGR5 | . | chr12 | 71586305 | chr12 | 60293422 | BND | MantaBND:3:77512:77513:0:0:0:1 | 0.9973400071825886 | PASS | 0 | 0 | 0 | 0 | 407.0 | 0.1557943207981581 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PTPRB | . | chr12 | 70524489 | chr6 | 154732807 | BND | MantaBND:3:78438:78483:0:0:0:0 | 0.9973376485490097 | PASS | 0 | 0 | 0 | 0 | 162.0 | 0.22216674987518722 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PLEKHG1 | SASH1 | chr6 | 150841193 | chr6 | 148380943 | DEL | MantaDEL:3:46956:46957:0:0:0 | 0.997238397962868 | PASS | 2 | 0 | 0 | 0 | 165.0 | 0.0287546545304096 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ESR1 | MDM1 | chr6 | 151852925 | chr12 | 68326713 | BND | MantaBND:3:78111:78112:0:0:0:0 | 0.9965848156628606 | PASS | 0 | 0 | 0 | 0 | 53.0 | 0.027066356228172293 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | AHI1 | RGS17 | chr6 | 135428728 | chr6 | 153007733 | DEL | MantaDEL:3:45914:45915:0:0:0 | 0.996448619255795 | PASS | 0 | 0 | 0 | 0 | 81.0 | 0.06263048016701461 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MDM2 | . | chr12 | 68828906 | chr12 | 83273855 | DEL | MantaDEL:3:78160:78161:0:0:0 | 0.9932958718474252 | PASS | 0 | 0 | 0 | 0 | 51.0 | 0.006571473123788732 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | MAGEL2 | . | chr15 | 23646945 | chr10 | 128441729 | BND | MantaBND:3:87123:87124:0:0:0:0 | 0.9916207016904267 | PASS | 62 | 0 | 0 | 0 | 45.0 | 0.010856453558504222 | 1 | 1 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ESR1 | NHSL1 | chr6 | 152129483 | chr6 | 138468382 | BND | MantaBND:3:46151:46152:0:0:0:0 | 0.8622504422122107 | PASS | 2 | 0 | 0 | 0 | 110.0 | 0.014774426171840648 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | ETV6 | . | chr12 | 11794688 | chr12 | 7251282 | BND | MantaBND:3:74491:74520:0:0:0:0 | 0.7425298995624006 | PASS | 3 | 0 | 0 | 0 | 526.0 | 0.13424124513618677 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | PTPN11 | STX2 | chr12 | 112507335 | chr12 | 130827213 | BND | MantaBND:3:80661:80662:1:0:0:1 | 0.04733610739722536 | FAIL | 3 | 0 | 0 | 0 | 94.0 | 0.011873350923482849 | 1 | 0 | 0 |
| 659_bHx-T1-TDNA-1_A23FG3YLT4_1_vs_659_bHx-N1-BDNA-1_A23FG3YLT4_1.manta_fusion | LGR5 | . | chr12 | 71585853 | chr12 | 71594113 | BND | MantaBND:3:77513:77514:0:0:0:0 | 0.0039543650969247725 | FAIL | 6 | 0 | 0 | 0 | 531.0 | 0.09286179214580169 | 1 | 0 | 0 |
29 rows