File Info
- Filename
- 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_90a6e5e8-0605-1411__90a6e5e8--20260605-141149/variant_calling/manta_fusion/659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1/659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 3.7 KB
- Workflow Run
- fusion_v2_220samples_90a6e5e8-0605-1411
- Published
- Jun 05, 2026 9:11 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | ZNF311 | . | chr6 | 28995925 | chr6 | 28981765 | DUP | MantaDUP:TANDEM:1:109123:109124:0:0:0 | 0.99998413756411 | PASS | 0 | 0 | 0 | 0 | 118.0 | 0.10779220779220779 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | OSBPL6 | TTN | chr2 | 178356780 | chr2 | 178622761 | DUP | MantaDUP:TANDEM:23286:0:1:0:0:0 | 0.9999770841806672 | PASS | 0 | 0 | 0 | 0 | 87.0 | 0.09103840682788052 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | DPP3 | SPTBN2 | chr11 | 66504693 | chr11 | 66698500 | DUP | MantaDUP:TANDEM:1:181264:181265:0:0:0 | 0.9999700531091945 | PASS | 0 | 0 | 0 | 0 | 71.0 | 0.045933014354066985 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | DDX24 | OTUB2 | chr14 | 94055148 | chr14 | 94036739 | BND | MantaBND:83417:0:1:0:0:0:1 | 0.999957723945129 | PASS | 0 | 0 | 0 | 0 | 173.0 | 0.1379525593008739 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | NFKBIZ | SENP7 | chr3 | 101859420 | chr3 | 101456005 | DUP | MantaDUP:TANDEM:1:63618:63619:1:0:0 | 0.9993367718073941 | PASS | 0 | 0 | 0 | 0 | 250.0 | 0.0552896122546673 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | GPC5 | . | chr13 | 91448847 | chr13 | 79435575 | BND | MantaBND:1:203655:203763:0:0:0:0 | 0.9984332121938052 | PASS | 0 | 0 | 0 | 0 | 69.0 | 0.0359251968503937 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | HLA-A | HLA-B | chr6 | 29943021 | chr6 | 31356739 | BND | MantaBND:1:109206:109211:0:0:0:0 | 0.9972913161762986 | PASS | 47 | 13 | 0 | 0 | 149.0 | 0.043824701195219126 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | EGFR | VOPP1 | chr7 | 55142411 | chr7 | 55439471 | BND | MantaBND:1:111709:129355:0:0:0:1 | 0.9962839859531479 | PASS | 0 | 0 | 0 | 0 | 30.0 | 0.0003543682704102494 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | IQCN | MAST3 | chr19 | 18257411 | chr19 | 18130864 | DUP | MantaDUP:TANDEM:91385:0:1:0:0:0 | 0.9749316174004605 | PASS | 0 | 0 | 0 | 0 | 44.0 | 0.015483870967741935 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | SNRPA1 | . | chr15 | 101281727 | chr15 | 101281424 | DEL | MantaDEL:85730:0:0:0:0:0 | 0.9361722412922401 | PASS | 0 | 0 | 0 | 0 | 53.0 | 0.08837209302325581 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | HLA-A | . | chr6 | 29948195 | chr6 | 29893480 | DEL | MantaDEL:1:109310:109311:0:0:0 | 0.0036638969226486773 | FAIL | 964 | 0 | 0 | 0 | 32.0 | 0.014678899082568808 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | HLA-A | HLA-C | chr6 | 29943399 | chr6 | 31271181 | BND | MantaBND:1:109206:109215:4:0:0:0 | 0.0018026097900873054 | FAIL | 33 | 16 | 0 | 0 | 122.0 | 0.06758448060075094 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | XRCC1 | . | chr19 | 43543378 | chr1 | 42124215 | BND | MantaBND:1:21410:21429:0:6:0:1 | 0.0005326108048038083 | FAIL | 1263 | 0 | 0 | 0 | 44.0 | 0.004701457451810061 | 1 | 1 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | HLA-C | . | chr6 | 31270399 | chr6 | 29957544 | BND | MantaBND:1:109215:109434:0:0:0:1 | 8.340410088475598e-05 | FAIL | 12 | 0 | 0 | 0 | 52.0 | 0.02091503267973856 | 1 | 0 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | P2RY8 | SIL1 | chrX | 1462696 | chr5 | 138957342 | BND | MantaBND:1:267539:267573:0:1:0:0 | 1.3826331732391571e-05 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.004819277108433735 | 1 | 1 | 0 |
| 659_boM-T1-TDNA-1_A23TNVHLT4_1_vs_659_boM-N1-BDNA-1_A23TNVNLT4_1.manta_fusion | DSPP | XRCC1 | chr4 | 87611031 | chr19 | 43543379 | BND | MantaBND:1:21410:39130:1:9:0:0 | 1.0532069319800486e-05 | FAIL | 497 | 1263 | 0 | 0 | 35.0 | 0.004795117698343505 | 1 | 1 | 0 |
17 rows