specimen gene1 gene2 chr1 pos1 chr2 pos2 sv_type event_id score filter_call pon_bp1_count pon_bp2_count pon_pair_count cosmic_hit somaticscore manual_vaf is_pass is_interchrom is_paralog_of_higher_score_call 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion NLRX1 NOL4 chr11 119179886 chr18 34097338 BND MantaBND:6:163659:163660:0:0:0:1 0.999789825786976 PASS 0 0 0 0 420.0 0.3587174348697395 1 1 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion FGFR2 TACC2 chr10 121482193 chr10 122031454 BND MantaBND:6:30789:152540:2:0:0:0 0.9989775852405687 PASS 7 0 0 0 997.0 0.3493150684931507 1 0 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion NELFCD . chr20 58981281 chr20 58981161 DEL MantaDEL:76008:0:0:0:0:0 0.8842970278486276 PASS 0 0 0 0 155.0 0.14551422319474835 1 0 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion ERVV-1 . chr19 53015385 chr19 53017062 DEL MantaDEL:6:218877:218879:0:0:0 0.0172200850329487 FAIL 0 0 0 0 156.0 0.1580135440180587 1 0 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion LYN MYH15 chr8 55910801 chr3 108510496 BND MantaBND:6:58385:58387:0:0:0:1 0.000800114071414832 FAIL 0 0 0 0 35.0 0.00743801652892562 1 1 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion DYSF HLA-DRB1 chr2 71603463 chr6 32578976 BND MantaBND:6:96691:96853:0:0:0:1 0.0005101334306040091 FAIL 0 401 0 0 117.0 0.05460750853242321 1 1 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion EGFR . chr7 55202930 chr16 60475689 BND MantaBND:6:13657:80088:0:3:0:1 1.6843844449292902e-05 FAIL 66 0 0 0 42.0 0.0031690140845070424 1 1 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion CSNK1A1 . chr5 149495892 chr8 95590922 BND MantaBND:6:91115:91120:0:3:0:1 5.682884244554879e-06 FAIL 30 0 0 0 42.0 0.0029311187103077674 1 1 0 659_ein-T1-TDNA-1_A23VCN5LT4_1_vs_659_ein-N1-BDNA-1_A23TNVNLT4_1.manta_fusion MLKL TP53 chr16 74686970 chr17 7677953 BND MantaBND:6:200127:200945:0:0:0:1 3.301932461997126e-06 FAIL 0 0 0 0 32.0 0.006118881118881119 1 1 0