File Info
- Filename
- 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_90a6e5e8-0605-1411__90a6e5e8--20260605-141149/variant_calling/manta_fusion/659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1/659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion.fusion_calls.tsv
- Size
- 8.1 KB
- Workflow Run
- fusion_v2_220samples_90a6e5e8-0605-1411
- Published
- Jun 05, 2026 9:42 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | GBA2 | . | chr9 | 35738554 | chr9 | 16112337 | DUP | MantaDUP:TANDEM:0:200755:200756:0:0:0 | 0.9995694451066766 | PASS | 0 | 0 | 0 | 0 | 54.0 | 0.035940803382663845 | 1 | 0 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | FGFR3 | TACC3 | chr4 | 1807379 | chr4 | 1737480 | DUP | MantaDUP:TANDEM:0:18142:116415:1:0:0 | 0.9223131410947344 | PASS | 547 | 0 | 0 | 1 | 1972.0 | 0.3550519357884797 | 1 | 0 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | KANK3 | PTPRG | chr19 | 8333148 | chr3 | 61844063 | BND | MantaBND:60676:0:1:0:1:0:0 | 0.0256061851384928 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.011811023622047244 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | NPIPB11 | . | chr16 | 29393989 | chr16 | 29129474 | BND | MantaBND:188234:0:1:0:0:0:0 | 0.01146053002145005 | FAIL | 0 | 0 | 0 | 0 | 44.0 | 0.03225806451612903 | 1 | 0 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | FUBP1 | NEK7 | chr1 | 77948702 | chr1 | 198194682 | DEL | MantaDEL:0:2289:16060:0:2:0 | 0.005534198932979396 | FAIL | 40 | 0 | 0 | 0 | 58.0 | 0.022968197879858657 | 1 | 0 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | CAPS2 | . | chr12 | 75321478 | chr6 | 53238175 | BND | MantaBND:0:268025:270271:0:0:0:0 | 0.001328254595062826 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.05128205128205128 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ELOVL6 | TMEM41A | chr4 | 110148165 | chr3 | 185483660 | BND | MantaBND:0:113055:113335:0:5:0:1 | 0.0011427522929847945 | FAIL | 0 | 1442 | 0 | 0 | 44.0 | 0.0061770761839396015 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | RNFT2 | STPG3 | chr12 | 116742357 | chr9 | 137252523 | BND | MantaBND:0:207631:207632:0:0:0:1 | 0.0006939700611309717 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.012396694214876033 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | NTRK3 | . | chr15 | 88010768 | chr1 | 115137160 | BND | MantaBND:0:21474:25837:0:1:0:1 | 0.0006802765766035523 | FAIL | 13 | 0 | 0 | 0 | 75.0 | 0.013931214627775359 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | RBBP6 | . | chr16 | 24570016 | chr6 | 2445909 | BND | MantaBND:0:136435:150075:0:0:0:0 | 0.0006507014470108564 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.0057692307692307696 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | NTRK3 | . | chr15 | 88010768 | chr15 | 74398584 | BND | MantaBND:0:21474:103342:0:1:0:1 | 0.0005530627395212825 | FAIL | 13 | 0 | 0 | 0 | 76.0 | 0.01730103806228374 | 1 | 0 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | NTRK3 | PROX1 | chr15 | 88010768 | chr1 | 214000044 | BND | MantaBND:0:21474:43496:0:1:0:1 | 0.00041433600741549157 | FAIL | 13 | 0 | 0 | 0 | 75.0 | 0.016160626836434867 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | CNTN5 | NTRK3 | chr11 | 99236461 | chr15 | 88010768 | BND | MantaBND:0:21474:44655:0:1:0:1 | 0.0003527333500983817 | FAIL | 0 | 13 | 0 | 0 | 79.0 | 0.016017316017316017 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | BRAF | GTF2A1 | chr7 | 140786369 | chr14 | 81186999 | BND | MantaBND:0:27324:180934:0:0:0:0 | 0.00035065421128760964 | FAIL | 0 | 0 | 0 | 0 | 50.0 | 0.008988764044943821 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | PRSS56 | . | chr2 | 232524819 | chr11 | 69842752 | BND | MantaBND:53673:0:1:0:0:0:0 | 0.0003286740962197496 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.01867219917012448 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | IFRD1 | NTRK3 | chr7 | 112463854 | chr15 | 88010767 | BND | MantaBND:0:21474:81070:0:1:0:0 | 0.0003155237595932562 | FAIL | 0 | 13 | 0 | 0 | 78.0 | 0.017641129032258066 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | NTRK3 | . | chr15 | 88010768 | chr4 | 13985205 | BND | MantaBND:0:21474:118012:0:1:0:0 | 0.00016783597330896592 | FAIL | 13 | 0 | 0 | 0 | 79.0 | 0.015151515151515152 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | DDHD2 | NSUN6 | chr8 | 38273289 | chr10 | 18604609 | BND | MantaBND:0:67406:188575:0:1:0:1 | 6.382746919602833e-05 | FAIL | 2 | 0 | 0 | 0 | 39.0 | 0.007017543859649123 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | NTRK3 | . | chr15 | 88010768 | chr10 | 20381505 | BND | MantaBND:0:21474:73090:0:1:0:0 | 4.306632211354766e-05 | FAIL | 13 | 0 | 0 | 0 | 79.0 | 0.01531058617672791 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | GRID1 | PAX3 | chr10 | 85667306 | chr2 | 222216726 | BND | MantaBND:0:10263:214831:0:5:0:1 | 3.2038131794682935e-05 | FAIL | 0 | 561 | 0 | 0 | 54.0 | 0.027755102040816326 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | GHR | IDH2 | chr5 | 42670923 | chr15 | 90083051 | BND | MantaBND:0:82317:209706:0:0:0:0 | 2.9745788518698124e-05 | FAIL | 0 | 214 | 0 | 0 | 34.0 | 0.014705882352941176 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ETV1 | . | chr7 | 13932070 | chr15 | 97459451 | BND | MantaBND:0:3499:106982:0:2:0:1 | 2.2490235237676113e-05 | FAIL | 263 | 0 | 0 | 0 | 94.0 | 0.018654884634266077 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | EPHA7 | . | chr6 | 93410168 | chr7 | 54811829 | BND | MantaBND:0:159514:159519:0:0:0:1 | 2.0810208180199363e-05 | FAIL | 2 | 0 | 0 | 0 | 54.0 | 0.007836990595611285 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | AR | PLXDC2 | chrX | 67720909 | chr10 | 19901016 | BND | MantaBND:0:5465:209764:0:2:0:1 | 1.634607003676834e-05 | FAIL | 440 | 0 | 0 | 0 | 34.0 | 0.013167013167013167 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ETV1 | . | chr7 | 13932070 | chr6 | 51218700 | BND | MantaBND:0:3499:156824:0:2:0:0 | 7.121720801250281e-06 | FAIL | 263 | 0 | 0 | 0 | 90.0 | 0.01772525849335303 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | TENT5C | . | chr1 | 117627866 | chrX | 89419096 | BND | MantaBND:0:3938:24202:0:9:0:0 | 6.667179533687299e-06 | FAIL | 68 | 0 | 0 | 0 | 106.0 | 0.0380794701986755 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ANKS1B | AR | chr12 | 99163504 | chrX | 67720909 | BND | MantaBND:0:5465:141323:0:2:0:0 | 6.133767112589303e-06 | FAIL | 0 | 440 | 0 | 0 | 31.0 | 0.011865524060646011 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | AR | . | chrX | 67720909 | chr9 | 82679072 | BND | MantaBND:0:5465:141824:0:2:0:0 | 3.978565173173163e-06 | FAIL | 440 | 0 | 0 | 0 | 35.0 | 0.011315417256011316 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ETV1 | . | chr7 | 13932070 | chr3 | 115267475 | BND | MantaBND:0:3499:69898:0:3:0:0 | 3.6254341871431897e-06 | FAIL | 263 | 0 | 0 | 0 | 92.0 | 0.017822736030828516 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | SENP7 | TUBGCP4 | chr3 | 101408479 | chr15 | 43406237 | BND | MantaBND:0:248235:264047:0:3:0:0 | 3.1300039947543967e-06 | FAIL | 0 | 2 | 0 | 0 | 54.0 | 0.005559416261292564 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | AR | . | chrX | 67720909 | chr1 | 39994903 | BND | MantaBND:0:5465:9132:0:2:0:0 | 2.503310621060947e-06 | FAIL | 440 | 0 | 0 | 0 | 34.0 | 0.011740331491712707 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ETV1 | . | chr7 | 13956785 | chr6 | 99002291 | BND | MantaBND:0:19662:169266:0:1:0:1 | 2.328200675723683e-06 | FAIL | 0 | 0 | 0 | 0 | 40.0 | 0.016706443914081145 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | PAX3 | ROR2 | chr2 | 222216726 | chr9 | 91711347 | BND | MantaBND:0:10263:70040:0:5:0:0 | 1.5893608975165464e-06 | FAIL | 561 | 0 | 0 | 0 | 33.0 | 0.020520915548539857 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | ETV1 | SCG3 | chr7 | 13932070 | chr15 | 51689432 | BND | MantaBND:0:3499:99188:0:4:0:1 | 1.4037073809349144e-06 | FAIL | 263 | 375 | 0 | 0 | 95.0 | 0.01988360814742968 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | AR | . | chrX | 67720909 | chr14 | 24570972 | BND | MantaBND:0:5465:82973:0:2:0:0 | 1.0164980559872048e-06 | FAIL | 440 | 0 | 0 | 0 | 33.0 | 0.011463250168577209 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | DDHD2 | ZFHX3 | chr8 | 38270670 | chr16 | 72996184 | BND | MantaBND:0:67406:87116:0:0:0:1 | 6.239493206661508e-07 | FAIL | 0 | 0 | 0 | 0 | 43.0 | 0.004026845637583893 | 1 | 1 | 0 |
| 659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion | FLRT2 | PAX3 | chr14 | 85598836 | chr2 | 222204957 | BND | MantaBND:0:4801:86610:0:1:0:1 | 3.113639181228111e-07 | FAIL | 0 | 3 | 0 | 0 | 36.0 | 0.007614213197969543 | 1 | 1 | 0 |
38 rows