specimen	gene1	gene2	chr1	pos1	chr2	pos2	sv_type	event_id	score	filter_call	pon_bp1_count	pon_bp2_count	pon_pair_count	cosmic_hit	somaticscore	manual_vaf	is_pass	is_interchrom	is_paralog_of_higher_score_call
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	GBA2	.	chr9	35738554	chr9	16112337	DUP	MantaDUP:TANDEM:0:200755:200756:0:0:0	0.9995694451066766	PASS	0	0	0	0	54.0	0.035940803382663845	1	0	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	FGFR3	TACC3	chr4	1807379	chr4	1737480	DUP	MantaDUP:TANDEM:0:18142:116415:1:0:0	0.9223131410947344	PASS	547	0	0	1	1972.0	0.3550519357884797	1	0	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	KANK3	PTPRG	chr19	8333148	chr3	61844063	BND	MantaBND:60676:0:1:0:1:0:0	0.0256061851384928	FAIL	0	0	0	0	35.0	0.011811023622047244	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	NPIPB11	.	chr16	29393989	chr16	29129474	BND	MantaBND:188234:0:1:0:0:0:0	0.01146053002145005	FAIL	0	0	0	0	44.0	0.03225806451612903	1	0	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	FUBP1	NEK7	chr1	77948702	chr1	198194682	DEL	MantaDEL:0:2289:16060:0:2:0	0.005534198932979396	FAIL	40	0	0	0	58.0	0.022968197879858657	1	0	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	CAPS2	.	chr12	75321478	chr6	53238175	BND	MantaBND:0:268025:270271:0:0:0:0	0.001328254595062826	FAIL	0	0	0	0	34.0	0.05128205128205128	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ELOVL6	TMEM41A	chr4	110148165	chr3	185483660	BND	MantaBND:0:113055:113335:0:5:0:1	0.0011427522929847945	FAIL	0	1442	0	0	44.0	0.0061770761839396015	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	RNFT2	STPG3	chr12	116742357	chr9	137252523	BND	MantaBND:0:207631:207632:0:0:0:1	0.0006939700611309717	FAIL	0	0	0	0	35.0	0.012396694214876033	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	NTRK3	.	chr15	88010768	chr1	115137160	BND	MantaBND:0:21474:25837:0:1:0:1	0.0006802765766035523	FAIL	13	0	0	0	75.0	0.013931214627775359	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	RBBP6	.	chr16	24570016	chr6	2445909	BND	MantaBND:0:136435:150075:0:0:0:0	0.0006507014470108564	FAIL	0	0	0	0	34.0	0.0057692307692307696	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	NTRK3	.	chr15	88010768	chr15	74398584	BND	MantaBND:0:21474:103342:0:1:0:1	0.0005530627395212825	FAIL	13	0	0	0	76.0	0.01730103806228374	1	0	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	NTRK3	PROX1	chr15	88010768	chr1	214000044	BND	MantaBND:0:21474:43496:0:1:0:1	0.00041433600741549157	FAIL	13	0	0	0	75.0	0.016160626836434867	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	CNTN5	NTRK3	chr11	99236461	chr15	88010768	BND	MantaBND:0:21474:44655:0:1:0:1	0.0003527333500983817	FAIL	0	13	0	0	79.0	0.016017316017316017	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	BRAF	GTF2A1	chr7	140786369	chr14	81186999	BND	MantaBND:0:27324:180934:0:0:0:0	0.00035065421128760964	FAIL	0	0	0	0	50.0	0.008988764044943821	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	PRSS56	.	chr2	232524819	chr11	69842752	BND	MantaBND:53673:0:1:0:0:0:0	0.0003286740962197496	FAIL	0	0	0	0	31.0	0.01867219917012448	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	IFRD1	NTRK3	chr7	112463854	chr15	88010767	BND	MantaBND:0:21474:81070:0:1:0:0	0.0003155237595932562	FAIL	0	13	0	0	78.0	0.017641129032258066	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	NTRK3	.	chr15	88010768	chr4	13985205	BND	MantaBND:0:21474:118012:0:1:0:0	0.00016783597330896592	FAIL	13	0	0	0	79.0	0.015151515151515152	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	DDHD2	NSUN6	chr8	38273289	chr10	18604609	BND	MantaBND:0:67406:188575:0:1:0:1	6.382746919602833e-05	FAIL	2	0	0	0	39.0	0.007017543859649123	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	NTRK3	.	chr15	88010768	chr10	20381505	BND	MantaBND:0:21474:73090:0:1:0:0	4.306632211354766e-05	FAIL	13	0	0	0	79.0	0.01531058617672791	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	GRID1	PAX3	chr10	85667306	chr2	222216726	BND	MantaBND:0:10263:214831:0:5:0:1	3.2038131794682935e-05	FAIL	0	561	0	0	54.0	0.027755102040816326	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	GHR	IDH2	chr5	42670923	chr15	90083051	BND	MantaBND:0:82317:209706:0:0:0:0	2.9745788518698124e-05	FAIL	0	214	0	0	34.0	0.014705882352941176	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ETV1	.	chr7	13932070	chr15	97459451	BND	MantaBND:0:3499:106982:0:2:0:1	2.2490235237676113e-05	FAIL	263	0	0	0	94.0	0.018654884634266077	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	EPHA7	.	chr6	93410168	chr7	54811829	BND	MantaBND:0:159514:159519:0:0:0:1	2.0810208180199363e-05	FAIL	2	0	0	0	54.0	0.007836990595611285	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	AR	PLXDC2	chrX	67720909	chr10	19901016	BND	MantaBND:0:5465:209764:0:2:0:1	1.634607003676834e-05	FAIL	440	0	0	0	34.0	0.013167013167013167	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ETV1	.	chr7	13932070	chr6	51218700	BND	MantaBND:0:3499:156824:0:2:0:0	7.121720801250281e-06	FAIL	263	0	0	0	90.0	0.01772525849335303	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	TENT5C	.	chr1	117627866	chrX	89419096	BND	MantaBND:0:3938:24202:0:9:0:0	6.667179533687299e-06	FAIL	68	0	0	0	106.0	0.0380794701986755	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ANKS1B	AR	chr12	99163504	chrX	67720909	BND	MantaBND:0:5465:141323:0:2:0:0	6.133767112589303e-06	FAIL	0	440	0	0	31.0	0.011865524060646011	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	AR	.	chrX	67720909	chr9	82679072	BND	MantaBND:0:5465:141824:0:2:0:0	3.978565173173163e-06	FAIL	440	0	0	0	35.0	0.011315417256011316	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ETV1	.	chr7	13932070	chr3	115267475	BND	MantaBND:0:3499:69898:0:3:0:0	3.6254341871431897e-06	FAIL	263	0	0	0	92.0	0.017822736030828516	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	SENP7	TUBGCP4	chr3	101408479	chr15	43406237	BND	MantaBND:0:248235:264047:0:3:0:0	3.1300039947543967e-06	FAIL	0	2	0	0	54.0	0.005559416261292564	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	AR	.	chrX	67720909	chr1	39994903	BND	MantaBND:0:5465:9132:0:2:0:0	2.503310621060947e-06	FAIL	440	0	0	0	34.0	0.011740331491712707	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ETV1	.	chr7	13956785	chr6	99002291	BND	MantaBND:0:19662:169266:0:1:0:1	2.328200675723683e-06	FAIL	0	0	0	0	40.0	0.016706443914081145	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	PAX3	ROR2	chr2	222216726	chr9	91711347	BND	MantaBND:0:10263:70040:0:5:0:0	1.5893608975165464e-06	FAIL	561	0	0	0	33.0	0.020520915548539857	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	ETV1	SCG3	chr7	13932070	chr15	51689432	BND	MantaBND:0:3499:99188:0:4:0:1	1.4037073809349144e-06	FAIL	263	375	0	0	95.0	0.01988360814742968	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	AR	.	chrX	67720909	chr14	24570972	BND	MantaBND:0:5465:82973:0:2:0:0	1.0164980559872048e-06	FAIL	440	0	0	0	33.0	0.011463250168577209	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	DDHD2	ZFHX3	chr8	38270670	chr16	72996184	BND	MantaBND:0:67406:87116:0:0:0:1	6.239493206661508e-07	FAIL	0	0	0	0	43.0	0.004026845637583893	1	1	0
659_ri-T1-TDNA-1_B23NMJMLT4_1_vs_659_ri-N1-BDNA-1_B23KFG5LT4_1.manta_fusion	FLRT2	PAX3	chr14	85598836	chr2	222204957	BND	MantaBND:0:4801:86610:0:1:0:1	3.113639181228111e-07	FAIL	0	3	0	0	36.0	0.007614213197969543	1	1	0