File Info
- Filename
- 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_90a6e5e8-0605-1411__90a6e5e8--20260605-141149/variant_calling/manta_fusion/659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1/659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion.fusion_calls.tsv
- Size
- 4.0 KB
- Workflow Run
- fusion_v2_220samples_90a6e5e8-0605-1411
- Published
- Jun 05, 2026 9:42 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ZNF532 | . | chr18 | 58920257 | chr18 | 58784813 | DUP | MantaDUP:TANDEM:0:127118:220885:1:0:0 | 0.9999681922337493 | PASS | 0 | 0 | 0 | 0 | 188.0 | 0.2828282828282828 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | MET | PAK2 | chr7 | 116772834 | chr3 | 196795706 | BND | MantaBND:0:127427:128549:0:0:0:1 | 0.9929432916750327 | PASS | 5 | 0 | 0 | 0 | 862.0 | 0.1796875 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | EFHC1 | PKHD1 | chr6 | 52417340 | chr6 | 51836449 | DUP | MantaDUP:TANDEM:67157:0:1:0:0:0 | 0.8751679242900847 | PASS | 0 | 0 | 0 | 0 | 32.0 | 0.010736196319018405 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NSD1 | SLC34A1 | chr5 | 177298462 | chr5 | 177390032 | DUP | MantaDUP:TANDEM:0:105877:106224:0:0:0 | 0.033301449936633525 | FAIL | 0 | 0 | 0 | 0 | 37.0 | 0.0045385779122541605 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CPLANE1 | . | chr5 | 37213576 | chr5 | 36364483 | DEL | MantaDEL:57391:0:1:0:0:0 | 0.031894750506741 | FAIL | 0 | 0 | 0 | 0 | 39.0 | 0.015856236786469344 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | KMT2A | . | chr11 | 118481024 | chr11 | 118177209 | DEL | MantaDEL:0:96543:175366:0:0:0 | 0.0018669840559422176 | FAIL | 2 | 0 | 0 | 0 | 31.0 | 0.00827966881324747 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | PRMT5 | . | chr14 | 22924706 | chr14 | 22940059 | BND | MantaBND:0:193034:193035:0:0:0:0 | 0.0003393583237206724 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.029411764705882353 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | . | chrX | 67710101 | chrX | 148121071 | BND | MantaBND:0:6102:144523:0:3:0:0 | 0.00014043924591688716 | FAIL | 57 | 0 | 0 | 0 | 97.0 | 0.010530137981118372 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | NEGR1 | chrX | 67710101 | chr1 | 71597473 | BND | MantaBND:0:6100:6102:0:3:0:0 | 0.00011518596644047473 | FAIL | 57 | 0 | 0 | 0 | 98.0 | 0.011275272161741835 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | GSK3B | . | chr3 | 119824179 | chr3 | 102978091 | BND | MantaBND:0:11964:63048:0:6:0:0 | 8.41451098639768e-05 | FAIL | 5 | 0 | 0 | 0 | 44.0 | 0.0075 | 1 | 0 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | . | chrX | 67710101 | chr16 | 59342583 | BND | MantaBND:0:6102:41361:0:3:0:1 | 5.750058901429889e-05 | FAIL | 57 | 0 | 0 | 0 | 97.0 | 0.01029098651525905 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | . | chrX | 67710101 | chr6 | 153229193 | BND | MantaBND:0:6102:119201:0:3:0:0 | 5.5405276725387175e-05 | FAIL | 57 | 0 | 0 | 0 | 97.0 | 0.010824934677118328 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | HLA-DQB1 | . | chr6 | 32665001 | chrHLA-DRB1*01:02:01 | 6265 | BND | MantaBND:0:109597:109608:1:0:0:0 | 3.2522544986270526e-05 | FAIL | 1217 | 0 | 0 | 0 | 75.0 | 0.023923444976076555 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | . | chrX | 67710101 | chr14 | 45257698 | BND | MantaBND:0:6102:194582:0:3:0:1 | 2.2572942377760577e-05 | FAIL | 57 | 0 | 0 | 0 | 93.0 | 0.011095204008589835 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | . | chrX | 67710101 | chr5 | 8922639 | BND | MantaBND:0:6102:47589:0:3:0:1 | 2.0737324876002678e-05 | FAIL | 57 | 0 | 0 | 0 | 94.0 | 0.01020408163265306 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | ZNF568 | chrX | 67710101 | chr19 | 36945211 | BND | MantaBND:0:6102:10935:0:3:0:1 | 2.000916258046749e-05 | FAIL | 57 | 0 | 0 | 0 | 95.0 | 0.011138183083884442 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | EIF2S1 | chrX | 67710069 | chr14 | 67373843 | BND | MantaBND:0:6102:195621:0:9:0:0 | 6.333831419810174e-06 | FAIL | 57 | 0 | 0 | 0 | 119.0 | 0.02933088909257562 | 1 | 1 | 0 |
| 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion | AR | . | chrX | 67710069 | chr6 | 98111106 | BND | MantaBND:0:6102:33503:0:8:0:0 | 2.1067535130620055e-06 | FAIL | 57 | 0 | 0 | 0 | 121.0 | 0.028054298642533938 | 1 | 1 | 0 |
19 rows