specimen gene1 gene2 chr1 pos1 chr2 pos2 sv_type event_id score filter_call pon_bp1_count pon_bp2_count pon_pair_count cosmic_hit somaticscore manual_vaf is_pass is_interchrom is_paralog_of_higher_score_call 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion ZNF532 . chr18 58920257 chr18 58784813 DUP MantaDUP:TANDEM:0:127118:220885:1:0:0 0.9999681922337493 PASS 0 0 0 0 188.0 0.2828282828282828 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion MET PAK2 chr7 116772834 chr3 196795706 BND MantaBND:0:127427:128549:0:0:0:1 0.9929432916750327 PASS 5 0 0 0 862.0 0.1796875 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion EFHC1 PKHD1 chr6 52417340 chr6 51836449 DUP MantaDUP:TANDEM:67157:0:1:0:0:0 0.8751679242900847 PASS 0 0 0 0 32.0 0.010736196319018405 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion NSD1 SLC34A1 chr5 177298462 chr5 177390032 DUP MantaDUP:TANDEM:0:105877:106224:0:0:0 0.033301449936633525 FAIL 0 0 0 0 37.0 0.0045385779122541605 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion CPLANE1 . chr5 37213576 chr5 36364483 DEL MantaDEL:57391:0:1:0:0:0 0.031894750506741 FAIL 0 0 0 0 39.0 0.015856236786469344 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion KMT2A . chr11 118481024 chr11 118177209 DEL MantaDEL:0:96543:175366:0:0:0 0.0018669840559422176 FAIL 2 0 0 0 31.0 0.00827966881324747 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion PRMT5 . chr14 22924706 chr14 22940059 BND MantaBND:0:193034:193035:0:0:0:0 0.0003393583237206724 FAIL 0 0 0 0 32.0 0.029411764705882353 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR . chrX 67710101 chrX 148121071 BND MantaBND:0:6102:144523:0:3:0:0 0.00014043924591688716 FAIL 57 0 0 0 97.0 0.010530137981118372 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR NEGR1 chrX 67710101 chr1 71597473 BND MantaBND:0:6100:6102:0:3:0:0 0.00011518596644047473 FAIL 57 0 0 0 98.0 0.011275272161741835 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion GSK3B . chr3 119824179 chr3 102978091 BND MantaBND:0:11964:63048:0:6:0:0 8.41451098639768e-05 FAIL 5 0 0 0 44.0 0.0075 1 0 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR . chrX 67710101 chr16 59342583 BND MantaBND:0:6102:41361:0:3:0:1 5.750058901429889e-05 FAIL 57 0 0 0 97.0 0.01029098651525905 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR . chrX 67710101 chr6 153229193 BND MantaBND:0:6102:119201:0:3:0:0 5.5405276725387175e-05 FAIL 57 0 0 0 97.0 0.010824934677118328 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion HLA-DQB1 . chr6 32665001 chrHLA-DRB1*01:02:01 6265 BND MantaBND:0:109597:109608:1:0:0:0 3.2522544986270526e-05 FAIL 1217 0 0 0 75.0 0.023923444976076555 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR . chrX 67710101 chr14 45257698 BND MantaBND:0:6102:194582:0:3:0:1 2.2572942377760577e-05 FAIL 57 0 0 0 93.0 0.011095204008589835 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR . chrX 67710101 chr5 8922639 BND MantaBND:0:6102:47589:0:3:0:1 2.0737324876002678e-05 FAIL 57 0 0 0 94.0 0.01020408163265306 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR ZNF568 chrX 67710101 chr19 36945211 BND MantaBND:0:6102:10935:0:3:0:1 2.000916258046749e-05 FAIL 57 0 0 0 95.0 0.011138183083884442 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR EIF2S1 chrX 67710069 chr14 67373843 BND MantaBND:0:6102:195621:0:9:0:0 6.333831419810174e-06 FAIL 57 0 0 0 119.0 0.02933088909257562 1 1 0 659_eqd-T1-TDNA-1_A23TNVYLT4_1_vs_659_eqd-N1-BDNA-1_A23TY32LT4_1.manta_fusion AR . chrX 67710069 chr6 98111106 BND MantaBND:0:6102:33503:0:8:0:0 2.1067535130620055e-06 FAIL 57 0 0 0 121.0 0.028054298642533938 1 1 0