File Info
- Filename
- 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_90a6e5e8-0605-1411__90a6e5e8--20260605-141149/variant_calling/manta_fusion/659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1/659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion.fusion_calls.tsv
- Size
- 9.0 KB
- Workflow Run
- fusion_v2_220samples_90a6e5e8-0605-1411
- Published
- Jun 05, 2026 9:46 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | P2RY1 | . | chr3 | 152836866 | chr3 | 154008788 | DUP | MantaDUP:TANDEM:1:240283:240288:0:0:0 | 0.07924656685439843 | PASS | 0 | 0 | 0 | 0 | 35.0 | 0.02158273381294964 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | TMEM132D | UBR1 | chr12 | 129508919 | chr15 | 42998265 | BND | MantaBND:200679:1:2:0:0:0:1 | 0.05906786278654186 | PASS | 0 | 0 | 0 | 0 | 32.0 | 0.02088167053364269 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FAT4 | . | chr4 | 125451538 | chr4 | 188128722 | BND | MantaBND:1:53862:294162:0:0:0:0 | 0.015632638260568127 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.017716535433070866 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ADGRL4 | . | chr1 | 78893133 | chr4 | 72893216 | BND | MantaBND:1:28333:28343:0:0:0:1 | 0.013660348584840633 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.01834862385321101 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | EPYC | OTOGL | chr12 | 91004235 | chr12 | 80336485 | DEL | MantaDEL:1:716871:716877:0:0:0 | 0.010107351266695092 | FAIL | 0 | 0 | 0 | 0 | 35.0 | 0.02452316076294278 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BIRC6 | . | chr2 | 32493610 | chr2 | 35217223 | BND | MantaBND:1:109057:109060:0:0:0:0 | 0.008299918476703156 | FAIL | 0 | 0 | 0 | 0 | 39.0 | 0.03169014084507042 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | OR4C15 | . | chr11 | 55554329 | chr11 | 55554187 | BND | MantaBND:206835:0:1:0:0:0:1 | 0.0075923275789967016 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.10227272727272728 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | TRIM9 | . | chr14 | 51025265 | chr10 | 97725053 | BND | MantaBND:1:910611:910612:0:3:0:0 | 0.0065600199497927204 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.02284263959390863 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ANKRD44 | GTF3C3 | chr2 | 197026920 | chr2 | 196780594 | DUP | MantaDUP:TANDEM:23978:1:2:0:0:0 | 0.005405000502419574 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.018442622950819672 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ULBP1 | . | chr6 | 149969303 | chr6 | 150301152 | BND | MantaBND:1:431932:432072:0:0:0:1 | 0.004501772183842744 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.0297029702970297 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CNTNAP2 | PAK6 | chr7 | 146976588 | chr15 | 40272343 | BND | MantaBND:174325:0:1:0:0:0:0 | 0.003928664480482356 | FAIL | 0 | 0 | 0 | 0 | 41.0 | 0.030201342281879196 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ALMS1 | EIF1AY | chr2 | 73596762 | chrY | 20589513 | BND | MantaBND:57825:0:1:0:0:0:0 | 0.003169480403687938 | FAIL | 0 | 0 | 0 | 0 | 43.0 | 0.06206896551724138 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | PDE8A | . | chr15 | 85115459 | chr15 | 85166995 | DEL | MantaDEL:1:821727:821735:0:0:0 | 0.0019134084011592585 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.034482758620689655 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ARHGAP19-SLIT1 | EPM2AIP1 | chr10 | 97210252 | chr3 | 36988241 | BND | MantaBND:1:202669:202688:0:0:0:1 | 0.0007867439287954332 | FAIL | 0 | 0 | 0 | 0 | 44.0 | 0.03515625 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NAE1 | . | chr16 | 66823592 | chr7 | 31389346 | BND | MantaBND:1:740920:845887:0:0:0:1 | 0.0007839562778477619 | FAIL | 0 | 0 | 0 | 0 | 43.0 | 0.038135593220338986 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | HLA-DPB1 | . | chr6 | 33086577 | chr6_GL000251v2_alt | 4498488 | BND | MantaBND:1:100747:390552:17:0:0:0 | 0.0005298159643508947 | FAIL | 51 | 0 | 0 | 0 | 479.0 | 0.8518518518518519 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CFAP47 | . | chrX | 36099758 | chrX | 4758548 | BND | MantaBND:247950:0:1:0:0:0:1 | 0.0002732121503831589 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.09333333333333334 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ATRX | MAGT1 | chrX | 77562348 | chrX | 77871176 | BND | MantaBND:1:975305:1010765:0:0:0:0 | 0.00023546685013538796 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.03862660944206009 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CENPK | . | chr5 | 65554898 | chr15 | 65221682 | BND | MantaBND:1:332342:332347:0:0:0:0 | 0.00014356805634131733 | FAIL | 0 | 0 | 0 | 0 | 39.0 | 0.03272727272727273 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | INTS6L | chr18 | 63128464 | chrX | 135575826 | BND | MantaBND:1:14620:65495:0:0:0:1 | 0.0001263956072519358 | FAIL | 2 | 0 | 0 | 0 | 110.0 | 0.03335919317300233 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | KIF15 | . | chr3 | 44784860 | chr4 | 43710641 | BND | MantaBND:85746:1:5:0:0:0:0 | 0.00012016808000837658 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.049586776859504134 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | C14orf39 | RTL4 | chr14 | 60468466 | chrX | 112361585 | BND | MantaBND:217406:1:3:0:1:0:1 | 9.066428475561637e-05 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.07142857142857142 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FAM120AOS | . | chr9 | 93447654 | chr2 | 62588461 | BND | MantaBND:1:560936:560942:0:0:0:1 | 7.476778822539364e-05 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.02643171806167401 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FBXW7 | SMCO4 | chr4 | 152322262 | chr11 | 93504909 | BND | MantaBND:1:300269:300559:0:7:0:0 | 6.701162415414282e-05 | FAIL | 98 | 0 | 0 | 0 | 36.0 | 0.009433962264150943 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | CFAP47 | DMD | chrX | 36160693 | chrX | 31952382 | BND | MantaBND:1:1004185:1004186:0:0:0:1 | 5.273643983077913e-05 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.0297029702970297 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | LHFPL3 | NHLRC2 | chr7 | 104490092 | chr10 | 113858627 | BND | MantaBND:1:611998:613402:0:0:0:0 | 5.224528086387296e-05 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.024128686327077747 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | NOTCH3 | . | chr19 | 15187467 | chr6 | 168405008 | BND | MantaBND:1:930774:930788:0:1:0:1 | 3.627621892755541e-05 | FAIL | 17 | 0 | 0 | 0 | 78.0 | 0.020224719101123594 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | GALC | . | chr14 | 87950665 | chr14 | 82137554 | BND | MantaBND:228021:0:1:0:0:0:0 | 3.325769804874507e-05 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.03125 | 1 | 0 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | ATP8B3 | LPP | chr19 | 1795897 | chr3 | 188664666 | BND | MantaBND:1:5587:256394:0:4:0:0 | 2.5624227191286153e-05 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.006644518272425249 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | . | chr18 | 63128464 | chr3 | 18481927 | BND | MantaBND:1:14620:98842:0:0:0:1 | 1.8025727703435997e-05 | FAIL | 2 | 0 | 0 | 0 | 111.0 | 0.030626780626780627 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | FANCB | TP63 | chrX | 14850604 | chr3 | 189699098 | BND | MantaBND:65094:1:5:0:0:0:0 | 1.1345923726743581e-05 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.044444444444444446 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | EGFR | ZC3H12C | chr7 | 55205003 | chr11 | 110125297 | BND | MantaBND:1:10538:245712:0:5:0:1 | 9.231643121703013e-06 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.06191369606003752 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | TMTC2 | chr18 | 63128464 | chr12 | 83055744 | BND | MantaBND:1:14620:95282:0:0:0:1 | 7.464924025012183e-06 | FAIL | 2 | 0 | 0 | 0 | 93.0 | 0.030868628858578606 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | SGCD | chr18 | 63128464 | chr5 | 156287669 | BND | MantaBND:1:14620:317161:0:0:0:1 | 7.310431920309692e-06 | FAIL | 2 | 0 | 0 | 0 | 93.0 | 0.030758226037195996 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | . | chr18 | 63128464 | chr16 | 63257970 | BND | MantaBND:1:14620:172552:0:0:0:1 | 7.214093032326456e-06 | FAIL | 2 | 0 | 0 | 0 | 92.0 | 0.03076923076923077 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BMX | ETNK1 | chrX | 15511484 | chr12 | 22673039 | BND | MantaBND:1:46586:689228:0:0:0:1 | 7.158513398768264e-06 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.0297029702970297 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | FRMPD3 | chr18 | 63128464 | chrX | 107531112 | BND | MantaBND:1:14620:245890:0:0:0:0 | 5.416146921311643e-06 | FAIL | 2 | 0 | 0 | 0 | 93.0 | 0.0301941049604601 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | BCL2 | . | chr18 | 63128464 | chr3 | 109753329 | BND | MantaBND:1:14620:20482:0:0:0:1 | 2.0336658356482423e-06 | FAIL | 2 | 0 | 0 | 0 | 105.0 | 0.03125 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | DOCK5 | NTRK3 | chr8 | 25391198 | chr15 | 88059051 | BND | MantaBND:1:5703:405075:0:8:0:1 | 1.9876114554046158e-06 | FAIL | 0 | 1484 | 0 | 0 | 38.0 | 0.05617352614015573 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | MYB | . | chr6 | 135206780 | chr12 | 105998681 | BND | MantaBND:1:419656:424969:0:0:0:1 | 1.9030244648283525e-06 | FAIL | 3 | 0 | 0 | 0 | 35.0 | 0.024390243902439025 | 1 | 1 | 0 |
| 659_ehU-T1-TDNA-1_A23TNVYLT4_1_vs_659_ehU-N1-BDNA-1_A23TY32LT4_1.manta_fusion | IGF1 | KDM5A | chr12 | 102402395 | chr12 | 352185 | BND | MantaBND:1:668897:669041:0:0:0:0 | 1.1354575618861316e-06 | FAIL | 6 | 0 | 0 | 0 | 34.0 | 0.005917159763313609 | 1 | 0 | 0 |
42 rows