File Info
- Filename
- 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/fusion_v2_220samples_90a6e5e8-0605-1411__90a6e5e8--20260605-141149/variant_calling/manta_fusion/659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1/659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 7.4 KB
- Workflow Run
- fusion_v2_220samples_90a6e5e8-0605-1411
- Published
- Jun 05, 2026 9:50 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | DEUP1 | ZNF587B | chr11 | 93412741 | chr19 | 57841423 | BND | MantaBND:2:946878:947816:0:0:0:1 | 0.9991128510828572 | PASS | 0 | 5 | 0 | 0 | 56.0 | 0.022792022792022793 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SAMD12 | . | chr8 | 118379571 | chr8 | 118172893 | BND | MantaBND:2:549289:549292:0:0:0:1 | 0.8357071476096739 | PASS | 0 | 0 | 0 | 0 | 33.0 | 0.009852216748768473 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | RELA | . | chr11 | 65662375 | chr11 | 90241578 | DEL | MantaDEL:2:660760:660761:0:1:0 | 0.7803570211841799 | PASS | 5 | 0 | 0 | 0 | 39.0 | 0.002777777777777778 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | KIR2DS4 | KIR3DL2 | chr19 | 54835225 | chr19 | 54851245 | DEL | MantaDEL:2:950345:950352:0:0:0 | 0.2414287997346637 | PASS | 0 | 0 | 0 | 0 | 35.0 | 0.15217391304347827 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | HMMR | SLIT3 | chr5 | 163484095 | chr5 | 169031398 | DUP | MantaDUP:TANDEM:2:392164:392571:0:0:0 | 0.044139604882431016 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.018556701030927835 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TBC1D32 | . | chr6 | 121304775 | chr6 | 121355685 | BND | MantaBND:2:436203:436215:0:0:0:0 | 0.02957913464933901 | FAIL | 0 | 0 | 0 | 0 | 37.0 | 0.0182370820668693 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MSH3 | . | chr5 | 80775695 | chr5 | 57768922 | BND | MantaBND:2:369351:369354:0:1:0:1 | 0.010056664413797888 | FAIL | 0 | 0 | 0 | 0 | 31.0 | 0.019271948608137045 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MAB21L1 | TBP | chr13 | 35476375 | chr6 | 170562053 | BND | MantaBND:2:104572:348012:3:0:0:1 | 0.0032889700724735055 | FAIL | 2 | 61 | 0 | 0 | 131.0 | 0.08133971291866028 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ACRV1 | FARP1 | chr11 | 125676932 | chr13 | 98376696 | BND | MantaBND:2:681272:681276:0:0:0:1 | 0.002410127463524475 | FAIL | 0 | 0 | 0 | 0 | 33.0 | 0.031746031746031744 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ATM | . | chr11 | 108303026 | chr2 | 163905273 | BND | MantaBND:2:265798:675177:0:0:0:0 | 0.0008694315082651185 | FAIL | 0 | 0 | 0 | 0 | 41.0 | 0.011764705882352941 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | IKZF3 | SPNS2 | chr17 | 39765493 | chr17 | 4503918 | BND | MantaBND:2:872681:873693:0:1:0:0 | 0.0007367239776178516 | FAIL | 0 | 0 | 0 | 0 | 47.0 | 0.008888888888888889 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | VEZF1 | . | chr17 | 57979244 | chr6 | 78249879 | BND | MantaBND:2:476794:476796:0:8:0:1 | 0.0007219115832009924 | FAIL | 151 | 0 | 0 | 0 | 86.0 | 0.09196645929131729 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NRAS | . | chr1 | 114704552 | chr1 | 114704094 | DUP | MantaDUP:TANDEM:2:56712:56712:14:1:0 | 0.0005352666407458845 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.015047879616963064 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ABCA12 | SPAG16 | chr2 | 214989358 | chr2 | 213686947 | BND | MantaBND:2:208717:208718:0:0:0:1 | 0.000261575978708749 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.0189873417721519 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | THSD7B | chr17 | 72125896 | chr2 | 136888982 | BND | MantaBND:2:34471:175400:0:0:0:0 | 0.0002527179056986057 | FAIL | 14 | 0 | 0 | 0 | 95.0 | 0.021621621621621623 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CD2AP | CDC42BPB | chr6 | 47582003 | chr14 | 103027037 | BND | MantaBND:2:635287:635291:0:0:0:1 | 0.00021793824799874303 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.03202846975088968 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | RNMT | . | chr18 | 13741624 | chr18 | 51829618 | BND | MantaBND:293788:0:1:0:0:0:1 | 0.00016463669741462067 | FAIL | 0 | 0 | 0 | 0 | 32.0 | 0.018480492813141684 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CNOT1 | PLCG2 | chr16 | 58577949 | chr16 | 81854612 | BND | MantaBND:2:838673:850382:0:1:0:1 | 0.00012842737237828963 | FAIL | 0 | 0 | 0 | 0 | 37.0 | 0.004176334106728539 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | ALS2 | SEPTIN12 | chr2 | 201762069 | chr16 | 4785859 | BND | MantaBND:2:322596:323650:0:0:0:0 | 0.00010155418316132722 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.015306122448979591 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | FGFR2 | . | chr10 | 121577312 | chr4 | 160198093 | BND | MantaBND:2:40135:633787:0:7:0:0 | 6.671792123578078e-05 | FAIL | 37 | 0 | 0 | 0 | 36.0 | 0.001978891820580475 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TGFBR1 | . | chr9 | 99151449 | chr19 | 21698119 | BND | MantaBND:2:22075:582495:0:4:0:1 | 6.0640152759925195e-05 | FAIL | 7 | 0 | 0 | 0 | 50.0 | 0.009652509652509652 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | SOX9 | . | chr17 | 72125896 | chr3 | 49790228 | BND | MantaBND:2:34471:106038:0:1:0:1 | 5.4236896859029385e-05 | FAIL | 14 | 0 | 0 | 0 | 95.0 | 0.01916376306620209 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | HLA-DRB5 | MACROH2A2 | chr6 | 32519404 | chr10 | 70083471 | BND | MantaBND:2:408600:408667:0:0:0:1 | 5.0133758410237805e-05 | FAIL | 1002 | 0 | 0 | 0 | 100.0 | 0.05909090909090909 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MYH4 | . | chr17 | 10456537 | chr4 | 35937627 | BND | MantaBND:2:302945:302947:0:0:0:0 | 4.500063017601395e-05 | FAIL | 0 | 0 | 0 | 0 | 30.0 | 0.013888888888888888 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | NEGR1 | . | chr1 | 71404552 | chr2 | 234345299 | BND | MantaBND:2:20042:219334:0:3:0:1 | 2.8043447817233964e-05 | FAIL | 2 | 0 | 0 | 0 | 129.0 | 0.10377358490566038 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | TET1 | . | chr10 | 68694061 | chr10 | 68694628 | BND | MantaBND:2:101720:101720:350:0:0:0 | 2.4210194287438904e-05 | FAIL | 7 | 95 | 0 | 0 | 33.0 | 0.007894736842105263 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | B3GNT5 | CACNA1A | chr3 | 183270240 | chr19 | 13598275 | BND | MantaBND:2:286169:286177:0:0:0:1 | 2.3570847229563557e-05 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.02452316076294278 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | MYB | . | chr6 | 135205702 | chr6 | 131926889 | BND | MantaBND:2:66615:440700:0:0:0:1 | 6.7326289849688615e-06 | FAIL | 2 | 0 | 0 | 0 | 51.0 | 0.0129366106080207 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | BARD1 | . | chr2 | 214725701 | chr2 | 214725553 | BND | MantaBND:2:99858:99858:19:4:0:0 | 5.907574663383497e-06 | FAIL | 0 | 0 | 0 | 0 | 38.0 | 0.008466603951081843 | 1 | 0 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | CHD2 | NCR2 | chr15 | 93020715 | chr6 | 41338636 | BND | MantaBND:2:65529:822614:0:1:0:1 | 5.813964007463676e-06 | FAIL | 5 | 0 | 0 | 0 | 41.0 | 0.0040100250626566416 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | IGF1R | MIGA1 | chr15 | 98963045 | chr1 | 77803766 | BND | MantaBND:2:298334:823105:0:6:0:0 | 2.4681664744386064e-06 | FAIL | 4 | 0 | 0 | 0 | 39.0 | 0.003838771593090211 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | BRAF | . | chr7 | 140787394 | chr3 | 99257121 | BND | MantaBND:2:138092:486832:0:6:0:1 | 1.0726338582151209e-06 | FAIL | 112 | 0 | 0 | 0 | 37.0 | 0.007226738934056007 | 1 | 1 | 0 |
| 659_eEE-T1-TDNA-1_B23MHVMLT4_1_vs_659_eEE-N1-BDNA-1_B23L5TMLT4_1.manta_fusion | YAP1 | . | chr11 | 102233374 | chr11 | 102233516 | BND | MantaBND:2:277180:277180:331:5:0:1 | 4.631910437496195e-07 | FAIL | 2 | 0 | 0 | 0 | 37.0 | 0.009950248756218905 | 1 | 0 | 0 |
34 rows