File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/2270b06e4554b8b85e7ca7da8c22e3/.command.err
Size
449 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (659_ebV-T1-TDNA-1_A23VCN5LT4_1_vs_659_ebV-N1-BDNA-1_A23TNVNLT4_1)
Attempt

Content

View in new tab 
[annotateFusionVcf] Loading gene BED: protein_coding_genes.bed
[annotateFusionVcf] Loading actionable BED: foresight_panel_for_manta.bed
[annotateFusionVcf] Annotating VCF...
[annotateFusionVcf] WARNING: could not identify tumor sample by name (['659_ebV-N1-BDNA-1_A23TNVNLT4_1', '659_ebV-T1-TDNA-1_A23VCN5LT4_1']) — falling back to positional heuristic (column 1). FUSION_TUMOR_VAF / FUSION_NORMAL_VAF may be incorrect.
[annotateFusionVcf] Done.