[predict] Loading model from model.pkl …
  28 features loaded (LGBMClassifier, of 36 computed by annotator)
[predict] Loading PoN from pon …
  1D bins: 43,871  2D pairs: 39,238
[predict] Loading COSMIC from cosmic_fusion.tsv.gz …
  614 gene-pair orientations
[predict] Loading gene annotator from protein_coding_genes.bed …
[predict] Loading target panel from foresight_panel_for_manta.bed …
  201,779 panel intervals across 26 contigs
[predict] Tumor sample ID: '659_dYT-T1-TDNA-1_B23MHVMLT4_1'  Normal sample ID: '659_dYT-N1-BDNA-1_B23L5TMLT4_1'
[predict] Parsing VCF 659_dYT-T1-TDNA-1_B23MHVMLT4_1_vs_659_dYT-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.somatic_sv.annotated.vcf.gz …
  38 calls parsed (after intergenic/same-gene/on_panel filter)
  25 killed by hard filters → 13 surviving
  is_paralog_of_higher_score_call=1 for 0/13 calls
[predict] Scored 13 calls: 12 PASS at threshold 0.05
  After strict-match dedup: 13 calls (12 PASS)
  Final call set: 13 calls (12 PASS)
[predict] Writing 659_dYT-T1-TDNA-1_B23MHVMLT4_1_vs_659_dYT-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.somatic_sv.scored.vcf.gz …
[predict] Writing 659_dYT-T1-TDNA-1_B23MHVMLT4_1_vs_659_dYT-N1-BDNA-1_B23L5TMLT4_1.manta_fusion.fusion_calls.tsv …
[predict] Done.