File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/74189135732486a0ec1bcb16e5f121/.command.err
Size
457 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_CRL-T1-TDNA-SLD-01_A23T7FVLT4_1_vs_1173_CRL-N1-BDNA-01_A23MHW3LT4_1)
Attempt

Content

View in new tab 
[annotateFusionVcf] Loading gene BED: protein_coding_genes.bed
[annotateFusionVcf] Loading actionable BED: foresight_panel_for_manta.bed
[annotateFusionVcf] Annotating VCF...
[annotateFusionVcf] WARNING: could not identify tumor sample by name (['1173_CRL-N1-BDNA-01_A23MHW3LT4_1', '1173_CRL-T1-TDNA-SLD-01_A23T7FVLT4_1']) — falling back to positional heuristic (column 1). FUSION_TUMOR_VAF / FUSION_NORMAL_VAF may be incorrect.
[annotateFusionVcf] Done.