Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/042c954e76d295d10352d3db1510c9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/6ca4fe0e51e6e95b2eeb479c6d7e9d/659_w6-T1-TDNA-1_A23TNVHLT4_1_vs_659_w6-N1-BDNA-1_A23TNVNLT4_1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/042c954e76d295d10352d3db1510c9/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header