File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/dc7808ab847e178f2d827ac57306de/.command.log
Size
614 bytes
Task
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1;manta_fusion)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/f3b035ac628ff7b2e7e1875f930ea9/1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/dc7808ab847e178f2d827ac57306de/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/dc7808ab847e178f2d827ac57306de/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header