|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
5s |
4s |
0s |
0s |
0 bytes |
75% |
303.8 KB |
215.7 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
16s |
15s |
0s |
0s |
17.5 MB |
105% |
2.1 MB |
76.4 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_9C-T1-TDNA-01_A23T7FVLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1)
|
6s |
3s |
0s |
2s |
15.5 MB |
102% |
7.9 MB |
228.7 KB |
0 bytes |
236.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_CH0-T1-TDNA-01_A23KCGYLT4_1_vs_1173_CH0-N1-BDNA-01_B23KGCJLT4_1)
|
6s |
3s |
0s |
2s |
15.6 MB |
102% |
8.1 MB |
460.0 KB |
0 bytes |
472.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_CRL-T1-TDNA-SLD-01_A23T7FVLT4_1_vs_1173_CRL-N1-BDNA-01_A23MHW3LT4_1)
|
5s |
2s |
1s |
1s |
15.5 MB |
101% |
9.0 MB |
1.2 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_DXK-T1-TDNA-01_B23T7FYLT4_1_vs_1173_DXK-N1-BDNA-01_B23T7FYLT4_1)
|
4s |
1s |
0s |
2s |
15.5 MB |
99% |
8.2 MB |
546.4 KB |
0 bytes |
556.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_F0Y-T1-TDNA-01_B23TYFCLT4_1_vs_1173_F0Y-N1-BDNA-01_B23MHTGLT4_1)
|
4s |
1s |
1s |
1s |
59.2 MB |
100% |
9.1 MB |
1.4 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_FM-T1-TDNA-01_B23TYFCLT4_1_vs_1173_FM-N1-BDNA-01_B23MHTGLT4_1)
|
10s |
5s |
3s |
1s |
59.3 MB |
100% |
9.4 MB |
1.7 MB |
0 bytes |
1.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_GXL-T1-TDNA-01_B23MHWGLT4_1_vs_1173_GXL-N1-BDNA-01_B23L5TMLT4_1)
|
4s |
2s |
0s |
1s |
15.5 MB |
100% |
8.2 MB |
455.7 KB |
0 bytes |
464.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_GZ1-T1-TDNA-01_B23KCGWLT4_1_vs_1173_GZ1-N1-BDNA-01_B23MHTGLT4_1)
|
4s |
1s |
0s |
2s |
16.7 MB |
102% |
8.0 MB |
372.2 KB |
0 bytes |
380.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_H2E-T1-TDNA-01_B23KCGWLT4_1_vs_1173_H2E-N1-BDNA-01_B23MHTGLT4_1)
|
5s |
2s |
0s |
2s |
15.4 MB |
100% |
8.1 MB |
389.0 KB |
0 bytes |
400.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_HOB-T1-TDNA-01_B23MHVMLT4_1_vs_1173_HOB-N1-BDNA-01_B23L5TMLT4_1)
|
5s |
2s |
0s |
2s |
15.5 MB |
100% |
8.5 MB |
766.0 KB |
0 bytes |
776.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_IT6-T1-TDNA-01_B23MHWGLT4_1_vs_1173_IT6-N1-BDNA-01_B23L5TMLT4_1)
|
5s |
2s |
0s |
2s |
16.9 MB |
100% |
8.1 MB |
380.5 KB |
0 bytes |
392.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_J3R-T1-TDNA-01_B23TYFCLT4_1_vs_1173_J3R-N1-BDNA-01_A23MHW3LT4_1)
|
4s |
1s |
0s |
2s |
15.5 MB |
99% |
8.4 MB |
657.1 KB |
0 bytes |
664.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_JLC-T1-TDNA-01_B23TYFCLT4_1_vs_1173_JLC-N1-BDNA-01_A23MHW3LT4_1)
|
4s |
1s |
0s |
2s |
15.6 MB |
101% |
8.4 MB |
748.9 KB |
0 bytes |
760.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1)
|
4s |
2s |
0s |
1s |
15.4 MB |
99% |
8.1 MB |
435.3 KB |
0 bytes |
448.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_KQG-T1-TDNA-01_A23T3TCLT4_1_vs_1173_KQG-N1-BDNA-01_A23KFG7LT4_1)
|
5s |
2s |
0s |
2s |
16.7 MB |
100% |
8.6 MB |
861.8 KB |
0 bytes |
872.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_LAF-T1-TDNA-01_B23KCGWLT4_1_vs_1173_LAF-N1-BDNA-01_B23MHTGLT4_1)
|
5s |
2s |
0s |
2s |
15.5 MB |
100% |
8.5 MB |
776.8 KB |
0 bytes |
788.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_LV7-T1-TDNA-01_A23T3TCLT4_1_vs_1173_LV7-N1-BDNA-01_A23KFG7LT4_1)
|
4s |
1s |
0s |
2s |
15.6 MB |
99% |
8.2 MB |
460.8 KB |
0 bytes |
468.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1173_NFO-T1-TDNA-SLD-01_A23T7FVLT4_1_vs_1173_NFO-N2-BDNA-01_B23L5TMLT4_1)
|
4s |
2s |
0s |
1s |
15.4 MB |
101% |
8.5 MB |
824.3 KB |
0 bytes |
836.0 KB |
1 |