Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/573920b4f6970344afb3d75a6d1cae/659_cTi-T1-TDNA-1_B23MCVGLT4_1_vs_659_cTi-N1-BDNA-1_B23KFG5LT4_1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/a4e2fb4597fcc2492f7baa438ab3c7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/a4e2fb4597fcc2492f7baa438ab3c7/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header