Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/ce56d34b2441a220282a3bd6de96ab/659_wS-T1-TDNA-1_A23TNKKLT4_1_vs_659_wS-N1-BDNA-1_A23TY32LT4_1.manta_fusion.somatic_sv.scored.vcf.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/9cc8cf9cfdefcb3875639e74b2e88e/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/9cc8cf9cfdefcb3875639e74b2e88e/.command.run
==> STAGING COMPLETE (3 inputs)
[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header