Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/8600aa5aaba732d0f46e2b0a8e521f/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/8877226d0ee5ff5a63aaf9b101d9a0/659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1.manta_fusion.somatic_sv.scored.vcf.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/8600aa5aaba732d0f46e2b0a8e521f/.command.run
==> STAGING COMPLETE (3 inputs)
[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header