succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 5s 4s 0s 0s 0 bytes 100% 71.5 KB 3.2 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_csY-N1-BDNA-1_A23FG3YLT4_1) 2m 3s 3s - - 14.7 MB 103% 5.3 MB 110.7 KB 4.9 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_eHw-N1-BDNA-1_B23KFG5LT4_1) 3m 17s 32s - - 13.9 MB 103% 5.4 MB 110.4 KB 4.9 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_gK-N1-BDNA-1_B23KFG5LT4_1) 2m 31s 3s - - 14.8 MB 97% 5.3 MB 111.0 KB 4.9 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (659_csY-T1-TDNA-1_A23FG3YLT4_1) 5m 12s 3s - - 15.1 MB 121% 6.0 MB 111.9 KB 5.6 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (659_eHw-T1-TDNA-1_B23MCVGLT4_1) 9m 48s 31s - - 12.6 MB 133% 6.4 MB 111.7 KB 5.9 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (659_gK-T1-TDNA-1_A23MCTVLT4_1) 9m 28s 32s - - 10.2 MB 78% 6.4 MB 112.3 KB 5.9 MB 116.0 KB 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1) - 59s - - - - - - - - 2
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (659_eHw-T1-TDNA-1_B23MCVGLT4_1_vs_659_eHw-N1-BDNA-1_B23KFG5LT4_1) - 59s - - - - - - - - 2
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (659_gK-T1-TDNA-1_A23MCTVLT4_1_vs_659_gK-N1-BDNA-1_B23KFG5LT4_1) - 59s - - - - - - - - 2
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_csY-N1-BDNA-1_A23FG3YLT4_1) 25s 23s 0s 1s 13.2 MB 114% 4.8 MB 453 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_csY-T1-TDNA-1_A23FG3YLT4_1) 18s 16s 0s 1s 13.0 MB 119% 5.5 MB 453 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_eHw-N1-BDNA-1_B23KFG5LT4_1) 18s 16s 0s 1s 13.2 MB 122% 4.9 MB 453 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_eHw-T1-TDNA-1_B23MCVGLT4_1) 18s 16s 0s 1s 13.0 MB 110% 5.9 MB 454 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_gK-N1-BDNA-1_B23KFG5LT4_1) 25s 23s 0s 1s 12.9 MB 112% 4.9 MB 453 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_gK-T1-TDNA-1_A23MCTVLT4_1) 24s 22s 0s 1s 12.9 MB 102% 5.9 MB 454 bytes 0 bytes 8.0 KB 1
16 items found