succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 4s 2s 0s 1s 0 bytes 88% 84.2 KB 3.3 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_csY-N1-BDNA-1_A23FG3YLT4_1) 1m 34s 1s - - 15.4 MB 97% 5.3 MB 110.7 KB 5.0 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_eHw-N1-BDNA-1_B23KFG5LT4_1) 2m 13s 1s 1s 2m 11s 3.3 MB 95% 5.4 MB 110.4 KB 5.1 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_gK-N1-BDNA-1_B23KFG5LT4_1) 1m 59s 1s - - 3.2 MB 95% 5.3 MB 111.0 KB 5.1 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (659_csY-T1-TDNA-1_A23FG3YLT4_1) 4m 45s 1s - - 18.9 MB 116% 6.0 MB 111.9 KB 5.7 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (659_eHw-T1-TDNA-1_B23MCVGLT4_1) 8m 12s 1s - - 20.8 MB 112% 6.4 MB 111.7 KB 6.1 MB 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (659_gK-T1-TDNA-1_A23MCTVLT4_1) 8m 11s 1s - - 20.2 MB 88% 6.4 MB 112.4 KB 6.1 MB 116.0 KB 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (659_csY-T1-TDNA-1_A23FG3YLT4_1_vs_659_csY-N1-BDNA-1_A23FG3YLT4_1) - 59s - - - - - - - - 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (659_eHw-T1-TDNA-1_B23MCVGLT4_1_vs_659_eHw-N1-BDNA-1_B23KFG5LT4_1) - 59s - - - - - - - - 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (659_gK-T1-TDNA-1_A23MCTVLT4_1_vs_659_gK-N1-BDNA-1_B23KFG5LT4_1) - 59s - - - - - - - - 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_csY-N1-BDNA-1_A23FG3YLT4_1) 3s 1s 0s 1s 12.9 MB 107% 4.8 MB 469 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_csY-T1-TDNA-1_A23FG3YLT4_1) 3s 1s 0s 1s 13.2 MB 102% 5.5 MB 469 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_eHw-N1-BDNA-1_B23KFG5LT4_1) 3s 1s 0s 1s 13.1 MB 89% 4.9 MB 468 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_eHw-T1-TDNA-1_B23MCVGLT4_1) 3s 1s 0s 1s 13.1 MB 99% 5.9 MB 469 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_gK-N1-BDNA-1_B23KFG5LT4_1) 4s 2s 0s 1s 13.2 MB 92% 4.9 MB 468 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (659_gK-T1-TDNA-1_A23MCTVLT4_1) 2s 1s 0s 0s 12.9 MB 101% 6.0 MB 470 bytes 0 bytes 8.0 KB 1
16 items found