|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
12s |
10s |
0s |
1s |
0 bytes |
164% |
1.4 MB |
1.3 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
17s |
15s |
0s |
1s |
19.7 MB |
96% |
2.7 MB |
481.9 KB |
248.0 KB |
252.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_01S-T1-TDNA-1_B23KFCWLT4_1_vs_1029_01S-N1-BDNA-1_B23KGCJLT4_1)
|
5s |
1s |
1s |
2s |
59.5 MB |
100% |
10.1 MB |
2.3 MB |
0 bytes |
2.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_05O-T1-TDNA-1_23FC2GLT4_s02_vs_1029_05O-N1-BDNA-1_2375WFLT3_s02)
|
4s |
1s |
0s |
2s |
16.9 MB |
100% |
8.3 MB |
590.4 KB |
0 bytes |
600.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_05O-T1-TDNA-1_23K7YCLT4_1_vs_1029_05O-N1-BDNA-1_235YY7LT3_1)
|
4s |
1s |
1s |
1s |
16.9 MB |
100% |
8.9 MB |
1.2 MB |
0 bytes |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0W2-T1-TDNA-1_A23KCGYLT4_1_vs_1029_0W2-N1-BDNA-1_B23KGCJLT4_1)
|
7s |
2s |
3s |
1s |
59.3 MB |
100% |
12.1 MB |
4.1 MB |
0 bytes |
4.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0W2-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0W2-N1-BDNA-1_B23KGCJLT4_1)
|
7s |
1s |
4s |
1s |
59.4 MB |
100% |
13.6 MB |
5.5 MB |
0 bytes |
5.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0W2-T1-TDNA-1_B23NN7CLT4_1_vs_1029_0W2-N1-BDNA-1_B23KGCJLT4_1)
|
5s |
1s |
2s |
1s |
59.4 MB |
100% |
10.5 MB |
2.7 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_16G-T1-TDNA-1_B23KFCWLT4_1_vs_1029_16G-N1-BDNA-1_B23KGCJLT4_1)
|
5s |
2s |
1s |
1s |
59.4 MB |
99% |
9.9 MB |
2.1 MB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_22Q-T1-TDNA-1_A23NYHCLT4_1_vs_1029_22Q-N1-BDNA-1_B23H2GYLT3_1)
|
6s |
2s |
3s |
0s |
59.5 MB |
100% |
11.8 MB |
3.9 MB |
0 bytes |
3.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_2IN-T1-TDNA-1_23FC2GLT4_s07_vs_1029_2IN-N1-BDNA-1_2375WFLT3_s07)
|
8s |
3s |
2s |
2s |
59.0 MB |
100% |
11.6 MB |
3.7 MB |
0 bytes |
3.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_2IN-T1-TDNA-1_23K7YCLT4_1_vs_1029_2IN-N1-BDNA-1_235YY7LT3_1)
|
8s |
1s |
4s |
2s |
59.4 MB |
100% |
13.2 MB |
5.2 MB |
0 bytes |
5.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_2PG-T1-TDNA-1_A23MHKVLT4_1_vs_1029_2PG-N1-BDNA-1_A23KFG7LT4_1)
|
11s |
2s |
7s |
1s |
59.4 MB |
100% |
17.9 MB |
9.6 MB |
0 bytes |
9.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_38M-T1-TDNA-1_B23MMVMLT4_1_vs_1029_38M-N1-BDNA-1_B23MHTGLT4_1)
|
4s |
1s |
0s |
2s |
15.6 MB |
99% |
8.5 MB |
755.1 KB |
0 bytes |
764.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_3OA-T1-TDNA-1_A23MHKVLT4_1_vs_1029_3OA-N1-BDNA-1_A23KFG7LT4_1)
|
5s |
2s |
0s |
2s |
15.6 MB |
100% |
8.9 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_3PB-T1-TDNA-1_B23NYJ5LT4_1_vs_1029_3PB-N1-BDNA-1_B23H2GYLT3_1)
|
9s |
2s |
5s |
1s |
59.2 MB |
100% |
14.8 MB |
6.7 MB |
0 bytes |
6.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_3TP-T1-TDNA-1_A23L3H3LT4_1_vs_1029_3TP-N1-BDNA-1_B23L5TMLT4_1)
|
7s |
1s |
3s |
2s |
59.4 MB |
100% |
11.9 MB |
4.0 MB |
0 bytes |
4.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_3YY-T1-TDNA-1_A23TNLVLT4_1_vs_1029_3YY-N1-BDNA-1_A23MHW3LT4_1)
|
5s |
1s |
2s |
1s |
59.2 MB |
100% |
10.5 MB |
2.7 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_3YY-T1-TDNA-1_B23MHVMLT4_1_vs_1029_3YY-N1-BDNA-1_A23MHW3LT4_1)
|
6s |
2s |
2s |
1s |
59.5 MB |
100% |
11.0 MB |
3.1 MB |
0 bytes |
3.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_3YY-T1-TDNA-1_B23NN7CLT4_1_vs_1029_3YY-N1-BDNA-1_A23MHW3LT4_1)
|
6s |
1s |
2s |
2s |
59.4 MB |
100% |
10.5 MB |
2.7 MB |
0 bytes |
2.7 MB |
1 |