|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
5s |
3s |
0s |
1s |
0 bytes |
82% |
1.3 MB |
1.3 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
16s |
14s |
0s |
1s |
19.4 MB |
109% |
2.7 MB |
458.3 KB |
236.0 KB |
240.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_01F-T1-TDNA-1_A23TNVYLT4_1_vs_1029_01F-N1-BDNA-1_B23KFG5LT4_1)
|
3s |
1s |
0s |
1s |
17.0 MB |
100% |
8.5 MB |
873.9 KB |
0 bytes |
892.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_01F-T1-TDNA-1_B23NMJMLT4_1_vs_1029_01F-N1-BDNA-1_B23KFG5LT4_1)
|
4s |
1s |
1s |
1s |
59.5 MB |
100% |
9.3 MB |
1.6 MB |
0 bytes |
1.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_01F-T1-TDNA-1_B23VCL7LT4_1_vs_1029_01F-N1-BDNA-1_B23KFG5LT4_1)
|
4s |
1s |
1s |
1s |
59.4 MB |
100% |
9.0 MB |
1.3 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01)
|
4s |
1s |
1s |
1s |
59.1 MB |
100% |
9.7 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_032-T1-TDNA-1_23K7YCLT4_1_vs_1029_032-N1-BDNA-1_235YY7LT3_1)
|
28s |
25s |
1s |
1s |
59.3 MB |
100% |
9.8 MB |
2.0 MB |
0 bytes |
2.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0DT-T1-TDNA-1_23FC2GLT4_s03_vs_1029_0DT-N1-BDNA-1_2375WFLT3_s03)
|
4s |
1s |
1s |
1s |
59.1 MB |
100% |
9.6 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0DT-T1-TDNA-1_23K7YCLT4_1_vs_1029_0DT-N1-BDNA-1_235YY7LT3_1)
|
7s |
2s |
2s |
2s |
59.3 MB |
100% |
9.5 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0DT-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0DT-N1-BDNA-1_235YY7LT3_1)
|
5s |
1s |
2s |
1s |
59.4 MB |
100% |
10.6 MB |
2.8 MB |
0 bytes |
2.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0DT-T1-TDNA-1_B23NN7CLT4_1_vs_1029_0DT-N1-BDNA-1_235YY7LT3_1)
|
4s |
1s |
1s |
1s |
59.4 MB |
100% |
9.0 MB |
1.3 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0H2-T1-TDNA-1_B23MHVMLT4_1_vs_1029_0H2-N1-BDNA-1_A23MHW3LT4_1)
|
6s |
1s |
3s |
1s |
59.3 MB |
100% |
12.6 MB |
4.6 MB |
0 bytes |
4.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0I-T1-TDNA-1_A23KCGYLT4_1_vs_1029_0I-N1-BDNA-1_B23KGCJLT4_1)
|
5s |
2s |
1s |
1s |
59.2 MB |
101% |
8.6 MB |
951.1 KB |
0 bytes |
960.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0NX-T1-TDNA-1_23FC2GLT4_s04_vs_1029_0NX-N1-BDNA-1_2375WFLT3_s04)
|
4s |
1s |
1s |
1s |
59.1 MB |
100% |
9.7 MB |
2.0 MB |
0 bytes |
2.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0NX-T1-TDNA-1_23K7YCLT4_1_vs_1029_0NX-N1-BDNA-1_235YY7LT3_1)
|
9s |
1s |
1s |
6s |
59.3 MB |
100% |
10.1 MB |
2.3 MB |
0 bytes |
2.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0NX-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0NX-N1-BDNA-1_235YY7LT3_1)
|
5s |
1s |
2s |
1s |
59.1 MB |
100% |
10.3 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_0NX-T1-TDNA-1_B23NN7CLT4_1_vs_1029_0NX-N1-BDNA-1_235YY7LT3_1)
|
4s |
1s |
1s |
1s |
59.4 MB |
101% |
9.6 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_11H-T1-TDNA-1_B23KFCWLT4_1_vs_1029_11H-N1-BDNA-1_B23KGCJLT4_1)
|
5s |
1s |
2s |
1s |
59.3 MB |
100% |
10.9 MB |
3.1 MB |
0 bytes |
3.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_1BK-T1-TDNA-1_B23KFCWLT4_1_vs_1029_1BK-N1-BDNA-1_B23KGCJLT4_1)
|
4s |
1s |
1s |
1s |
59.3 MB |
100% |
9.3 MB |
1.6 MB |
0 bytes |
1.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (1029_1CU-T1-TDNA-1_A23KCGYLT4_1_vs_1029_1CU-N1-BDNA-1_B23KGCJLT4_1)
|
7s |
1s |
4s |
1s |
59.3 MB |
100% |
13.3 MB |
5.3 MB |
0 bytes |
5.3 MB |
1 |