mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vuqsxqc2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:49,036 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:49,881 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:50,059 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:09:13,842 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:09:14,059 - cnv_pipe.batch.run_model - INFO - Processing cluster 965 with 167 probes
2026-06-02 19:09:14,474 - cnv_pipe.batch.run_model.cluster965 - INFO - Child process started for cluster 965 with 167 probes
2026-06-02 19:12:24,234 - cnv_pipe.batch.run_model.cluster965 - INFO - Child process finished cluster 965. Wrote cluster_965_samples.csv and cluster_965_params.csv
2026-06-02 19:12:24,236 - cnv_pipe.batch.run_model - INFO - Cluster 965 finished in 190.18 seconds. Status: SUCCESS