File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/2d79d0bf36554d30330fe63546f60b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k0t78h1d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:32,085 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:32,921 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:33,103 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:57,223 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:57,430 - cnv_pipe.batch.run_model - INFO - Processing cluster 876 with 191 probes
2026-06-02 19:08:57,847 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process started for cluster 876 with 191 probes
2026-06-02 19:12:35,294 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process finished cluster 876. Wrote cluster_876_samples.csv and cluster_876_params.csv
2026-06-02 19:12:35,297 - cnv_pipe.batch.run_model - INFO - Cluster 876 finished in 217.87 seconds. Status: SUCCESS