File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/da3faed3961358489a2f754e0f857d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-13ntqk1x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:07:44,142 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:07:44,925 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:07:45,091 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:06,921 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:07,111 - cnv_pipe.batch.run_model - INFO - Processing cluster 644 with 184 probes
2026-06-02 19:08:07,476 - cnv_pipe.batch.run_model.cluster644 - INFO - Child process started for cluster 644 with 184 probes
2026-06-02 19:11:16,650 - cnv_pipe.batch.run_model.cluster644 - INFO - Child process finished cluster 644. Wrote cluster_644_samples.csv and cluster_644_params.csv
2026-06-02 19:11:16,652 - cnv_pipe.batch.run_model - INFO - Cluster 644 finished in 189.54 seconds. Status: SUCCESS