File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/586ceb02a0009d3b4efd74b07b8aef/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dw0i8g2p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:58,807 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:59,715 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:59,903 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:09:24,268 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:09:24,363 - cnv_pipe.batch.run_model - INFO - Processing cluster 1018 with 170 probes
2026-06-02 19:09:24,940 - cnv_pipe.batch.run_model.cluster1018 - INFO - Child process started for cluster 1018 with 170 probes
2026-06-02 19:12:35,892 - cnv_pipe.batch.run_model.cluster1018 - INFO - Child process finished cluster 1018. Wrote cluster_1018_samples.csv and cluster_1018_params.csv
2026-06-02 19:12:35,894 - cnv_pipe.batch.run_model - INFO - Cluster 1018 finished in 191.53 seconds. Status: SUCCESS