mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-41o822qq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:05:41,909 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:05:42,689 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:05:42,853 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:06:04,532 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:06:04,729 - cnv_pipe.batch.run_model - INFO - Processing cluster 88 with 157 probes
2026-06-02 19:06:05,098 - cnv_pipe.batch.run_model.cluster88 - INFO - Child process started for cluster 88 with 157 probes
2026-06-02 19:08:45,118 - cnv_pipe.batch.run_model.cluster88 - INFO - Child process finished cluster 88. Wrote cluster_88_samples.csv and cluster_88_params.csv
2026-06-02 19:08:45,121 - cnv_pipe.batch.run_model - INFO - Cluster 88 finished in 160.39 seconds. Status: SUCCESS