File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/0e6fb65c37eaf4c0b783958b033f36/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mvwvqzbw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:09:01,239 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:09:02,117 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:09:02,292 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:09:25,308 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:09:25,394 - cnv_pipe.batch.run_model - INFO - Processing cluster 1034 with 199 probes
2026-06-02 19:09:25,910 - cnv_pipe.batch.run_model.cluster1034 - INFO - Child process started for cluster 1034 with 199 probes
2026-06-02 19:13:06,591 - cnv_pipe.batch.run_model.cluster1034 - INFO - Child process finished cluster 1034. Wrote cluster_1034_samples.csv and cluster_1034_params.csv
2026-06-02 19:13:06,594 - cnv_pipe.batch.run_model - INFO - Cluster 1034 finished in 221.20 seconds. Status: SUCCESS