File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/47c7fa46705babb5d36689bd39292c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lxwpignz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:00,295 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:01,132 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:01,308 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:24,214 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:24,298 - cnv_pipe.batch.run_model - INFO - Processing cluster 721 with 196 probes
2026-06-02 19:08:24,811 - cnv_pipe.batch.run_model.cluster721 - INFO - Child process started for cluster 721 with 196 probes
2026-06-02 19:11:56,726 - cnv_pipe.batch.run_model.cluster721 - INFO - Child process finished cluster 721. Wrote cluster_721_samples.csv and cluster_721_params.csv
2026-06-02 19:11:56,729 - cnv_pipe.batch.run_model - INFO - Cluster 721 finished in 212.43 seconds. Status: SUCCESS